Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00549 ATGTTTGGGAACAAAGTGTTTCTAACTTATAAAAGAAGGCGTCAATCTCCAACTAGTAATTTTATCCATGGGAATTGTAACCAACATTCAGTGTGTGAAGATGCCCTTAATGACAACCAAACTGTGGAGAAAACATCAGAAAAGCATGAAGAAAAGACGGATACTTGTGGTGGGAAAATGCCGTGTTTCAAACAGCGGGATTATTCATCATTGCCTCTGCTTCAAAGCACTGGTGATCCTAAGACAGAAGTGCTTGGAAACAATGATACAATAGAAGCAATGGCTACTGCCCATGAATCATTTTCAACAGAGGATCCCTGTGAGGATAACATCAAGAATGATGATGGTGAGTTGCCCATAGTAGAGAAGACTTCAGATAATGATTGCAATACTCAGAGAAATTCCTGTGCCCTTGAAAGCTCTTGTAATGGATGTGACAACTGTTCTAATAAAATTTCCCTGCCAGTTGAATTGGGTGCTGTCAATGATTTTAATTTAGTCAACTCAGAAACATTGATCACAAGGGATATCAGTTCTTCGCAAGTCAATACATCTACTATTTCTAATATTTCAATGGATGATCCTACTGGTTGTCGCCCCAAAGGTAATATTGGAAACCCATCTGTAGATAGGGTTATTCGGGCCAACTTGACCAGTCCTCTAATAACCTTCAGTCGATGTTACAAAAGAAAAAAGTGGTTAGATGGAAATGACAAGCAAAACAGCTTATTGCACACGAAGGAAAACATTTCAGTGTTAACCAAGTGGAGTATGCTTGCAAATGGCAATCTATGTTCTAGTGATGAATCATCCAGCGAGGAATGTCCTGTAGATAATGTACCTGACCTTAATCAATCAGTGGAGCTTTCAGAAAAAGGGAAGACATTGAGTGAAACTAAATACAAAAAATCTTGTAGAAGTTGCTCTATGTCTTTCCTGACAGACCTTAATCAATCTGCTGAGCTTACAGAAAGAGGGGAGCTTTGTCAAACTCAAGAAAAAGTCAAAAGTAGTGATTCTCCGTGTTCCCCTGGAGTTGTTTCTGAAACATGTATGACAGACATGAGAAAGAAACTTGGTCATGGGGAAGACTCCGGAAAAAATGCCTCTCATACAGACAGAACAGGAGAACTGAGCCACAGTTGTCTGATTCACACGGAAGACCTACATCTTAATAAGGATTGCCAGGTAGTCTCTGTCAAAGTTGATTCTGAAGATCCCTATCCTGCAGCCGCAGGCACTAATCAGGAACTACAAAAGTCCCAAACCTTGTTGTGTGAGGCCAATGAACATGGTTTGGGCAATGAAATGATGAAAATTGCTGAATACCAACCTCAGTTTGACCTACCTAATAACTCTGCGGAAGAGCACATTGTTGATTTAAACATGGGTGCTGAGAAGCATCCCTTTCATTTGAGGATGAGAGCTCCTGCGTCCAAATTGGAATCTGCATGCAGTAGTTCTGCCATTGCTGAAGATAAAGTTTCTGAACTGGACCTTTTAAATGCTAGAAATACACAGCTGATTTCAGAAGGAAAGACTACAGCCGGTGTTTGCTCAAGTAGTACTCAAGCTCAGTTAATGATGACTGAAGAAAGAATGAGGGTTCAACAAACAAAAACCAGTAAACAAAAATCGATGCCTATGATTTCTCTTTCTTTGGGCTTGTCTTTACCTATGGAGCTCAAGGCTAGGGTCAGTGATTCTGTTAATAGTATGTCAGTTTTGTCTTTGTCAAATTCAACCACTGAAACTATAGATATTGTGCAAGATGGACTATGTCGGTCTTCATCACCAAACCGGAAACTATCGCATCCCAGGAACCAGGTAGTATTTGACAACATTGTACGCAGAACAAGAGCTTTAAATGAAAGAGGAAAATTTCAAGAATACTTGAAGCCACACCCTATCATGTGGTCTGAAGAGGAGTTGGATTTTCTTTGGATTGGTGTAAGGAGACATGGTAGGGGCAATTGGGATGCCATGTTAAGGGATCCTAGATTGCGGTTTTCACCATCAAGGGTGGCAGGGGACCTTGCTGAGAGGTGGGAGGCTGAACAATTAAAACTTTTGAACGATATTGATGTTTCACAGTTCATGTATCCAGCAGCAGAAAGGGCAGCAGCTGTGGCATCATTGCAAGGAAACTTTTGCCACTTGGATCCTAAACAAAGTTTCTGGGAGAGTAACCATTTGAAGAGGCCTATTACCAGATATAACTTTCAAAGCAACACCACTGCGCACACTCATAGGCCAACTATTCATTCCAGAAAGACCAATTACAACAACAGAGACAAGTATGAACTAGGATTTTTCCACTCTCCTGGAAGTTTGAGCATTTGCAGGCAGAACTCTTACTCGAATAACTATCCCTTTAATTGTTTGGCTGCGACAAATAATTTGCCCCACTGGCTCAGAGAAGCTGTTAACACTCCTCCAATCATGCCAAATATGTCTGCAGTGGGTTCCTTGAGTTCTCACCCAGACATGCCAGGAACTTCAGATCATTGCTTTAATACCAGCAAGTCATGCTTTGTACCTCAAAATTGGTTCAATGGTCTGAGGGCAAGTGAGCCACACATGCCAAATGGTTCTTACTATTCAACCTATTCAAGGAGAAAATATGGGGTGGTGAAGATGAACAAGTCTCTGGAATCTCGTGTCCAGAAACCAGATGACTTGATCATTGTTGATAGTGACACTTCTTCTGAAGAGACCATATCTGATGATCATCGTGCCAGCTTGTAG 2748 0.4112 MFGNKVFLTYKRRRQSPTSNFIHGNCNQHSVCEDALNDNQTVEKTSEKHEEKTDTCGGKMPCFKQRDYSSLPLLQSTGDPKTEVLGNNDTIEAMATAHESFSTEDPCEDNIKNDDGELPIVEKTSDNDCNTQRNSCALESSCNGCDNCSNKISLPVELGAVNDFNLVNSETLITRDISSSQVNTSTISNISMDDPTGCRPKGNIGNPSVDRVIRANLTSPLITFSRCYKRKKWLDGNDKQNSLLHTKENISVLTKWSMLANGNLCSSDESSSEECPVDNVPDLNQSVELSEKGKTLSETKYKKSCRSCSMSFLTDLNQSAELTERGELCQTQEKVKSSDSPCSPGVVSETCMTDMRKKLGHGEDSGKNASHTDRTGELSHSCLIHTEDLHLNKDCQVVSVKVDSEDPYPAAAGTNQELQKSQTLLCEANEHGLGNEMMKIAEYQPQFDLPNNSAEEHIVDLNMGAEKHPFHLRMRAPASKLESACSSSAIAEDKVSELDLLNARNTQLISEGKTTAGVCSSSTQAQLMMTEERMRVQQTKTSKQKSMPMISLSLGLSLPMELKARVSDSVNSMSVLSLSNSTTETIDIVQDGLCRSSSPNRKLSHPRNQVVFDNIVRRTRALNERGKFQEYLKPHPIMWSEEELDFLWIGVRRHGRGNWDAMLRDPRLRFSPSRVAGDLAERWEAEQLKLLNDIDVSQFMYPAAERAAAVASLQGNFCHLDPKQSFWESNHLKRPITRYNFQSNTTAHTHRPTIHSRKTNYNNRDKYELGFFHSPGSLSICRQNSYSNNYPFNCLAATNNLPHWLREAVNTPPIMPNMSAVGSLSSHPDMPGTSDHCFNTSKSCFVPQNWFNGLRASEPHMPNGSYYSTYSRRKYGVVKMNKSLESRVQKPDDLIIVDSDTSSEETISDDHRASL 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00549 915 SUPERFAMILY Homeodomain-like 636 684 IPR009057 -
Vian2g00549 915 Gene3D - 638 687 - -
Vian2g00549 915 MobiDBLite consensus disorder prediction 896 915 - -
Vian2g00549 915 Coils Coil 32 52 - -
Vian2g00549 915 ProSiteProfiles Myb-like domain profile. 639 687 IPR001005 -
Vian2g00549 915 CDD SANT_TRF 637 683 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00549 - - vra:106759339 1738.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00549 2 6655262 6665918 Vian2g00549 2 6655262 6665918 ECH