Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00532 ATGGCTCCAAGCTTCAACAAACGAAGAATCCTTTCCGCTTTTCGCATTTTCCTTCTCCTCTCCCTCTTCTTTAACCTATCATCCACCTTTGCTCAGGATTCTCTCTCGCAGAACGCAATGGAAGGATTCGGTGGATCTGTGGATCTCGGTCGCCGCGGCAAAATTGTGTTGAATGAAATAGATAATGGTTCGATCCTTTCTCTTGGCTTGGATTCCACCGGACCTGGACTCTTCGATGCTTTTTTCGCGAGTTTATCGATGATCATTGTCAGCGAGATCGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCATCCTAAGTCAATTGTCTTGTCTGGTGCGCTAAGTGCGCTGTTTATAATGACGGTACTTTCTACTGGGCTAGGCAGGATTGTCCCAAACTTGATTTCTAGGAAGCATACAAATAGTGCGGCTACAGTTCTTTATGCTTTCTTTGGGCTAAGGTTACTATACATTGCATGGAGATCAACTGAATCAAAATCCTCCCAGAAGAAAGAAATGGAAGAAGTTGAAGAAAAACTGGAAGGCGGACAAGGGAAAACTCCAGTTCGGCGTTTCTTTTCAAGATTTTGTACACCAATTTTTTTGGAGTCCTTTATTTTAACATTCCTTGCTGAGTGGGGTGATCGTAGCCAGATAGCGACAATTGCACTGGCGACCCACAAAAATGCTCTGGGAGTAGCTGTTGGGGCCTCTTTGGGTCACACCTTCTGTACTTCGCTGGCAGTGGTGGGAGGAAGCATGCTGGCATCTAAAATTTCCCAACGCTCAGTAGCTACTGTTGGTGGCTTGCTCTTCCTCGGATTTTCCATATCTTCATACTTTTACCCGCCTCTATGA 870 0.4529 MAPSFNKRRILSAFRIFLLLSLFFNLSSTFAQDSLSQNAMEGFGGSVDLGRRGKIVLNEIDNGSILSLGLDSTGPGLFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALFIMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSTESKSSQKKEMEEVEEKLEGGQGKTPVRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGASLGHTFCTSLAVVGGSMLASKISQRSVATVGGLLFLGFSISSYFYPPL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00532 289 Coils Coil 170 190 - -
Vian2g00532 289 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 65 286 IPR001727 -
Vian2g00532 289 Pfam Uncharacterized protein family UPF0016 207 279 IPR001727 -
Vian2g00532 289 Pfam Uncharacterized protein family UPF0016 83 156 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00532 Vian-Chr2 6452427 6455339 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00532 K23541 - gmx:100785207 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00532 2 6452427 6455339 Vian2g00532 2 6452427 6455339 ECH