Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00530 ATGAGACAAAGAATGGAAAGGCTTGTGATTCTTCCTTTCTCTGCTGGTTGCATCTCTGAGGCCAGTGTTGCTGTTGGTGTTCCTCACACAAGAAGATCAAAACCATACACCAATCCATCACCTCCTTCAATAAAAGGAGCAAAAGGTGTTGAGGATTCAGAGACTTTGTCTGGTGAAAACATGAAGAATAACCTATCCAATGGCTTCAACAGACTCTTCAAGGGTTTCAAGAACTTCTCTCAATTGTTTGTGGAGAAAGATGAGTACGAAGAGGTGGAAATAGACATGGAAATAGGTTGTCCAACAGATGTGCAGCACGTGACACACATCGGTTGGGATGGCATTGCAACTTCTAATGATCCCATTAAAGGATGGGATCCTCTCATTCCTCCACAACTCCTCTCTCTATCATCTCAATCTTCTGCCCTCCAACACCCAAAACTTCAAACATCATCGTCATCTCCTAATTAG 471 0.4289 MRQRMERLVILPFSAGCISEASVAVGVPHTRRSKPYTNPSPPSIKGAKGVEDSETLSGENMKNNLSNGFNRLFKGFKNFSQLFVEKDEYEEVEIDMEIGCPTDVQHVTHIGWDGIATSNDPIKGWDPLIPPQLLSLSSQSSALQHPKLQTSSSSPN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00530 156 Gene3D CRIB domain 95 146 IPR036936 -
Vian2g00530 156 ProSiteProfiles CRIB domain profile. 98 111 IPR000095 -
Vian2g00530 156 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC2 1 153 IPR044509 -
Vian2g00530 156 CDD CRIB 96 131 - -
Vian2g00530 156 SMART PBD_5 98 132 IPR000095 -
Vian2g00530 156 Pfam P21-Rho-binding domain 97 114 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00530 Vian-Chr2 6440121 6441250 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00530 - - gmx:100787187 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00530 2 6440121 6441250 Vian2g00530 2 6440121 6441250 ECH