Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00518 ATGGCTCTGAATGTTTGTGTTTCTCCAAACCCTAAATGGGTTGCATCTCCTTCCTTAGATAGTGGTTCTTCTTTGAGACCTTCACTTGGGTCTTGTTTTGGTAACCTAAACATTCCTAGTGTGAATCTCAACTTGAGTACTAGAACCACAAGTTTGAGTTTGAGAAGAAGTTTTAGTGTAAGATCTAGTTTGGAAACTGCAGGGCCCACAGTCACAGTAGGACAAGTCACCGAGGTAAACAAGGACACCTTCTGGCCGATTGTTAAGGCTGCCGGGGATAAAACCGTTGTCCTAGACATGTACACCCAATGGTGTGGCCCTTGCAAAGTGATGGCTCCAAAGTTTCAAGAATTATCTAAGAAGTATGAGGATGTTGTCTTTCTAAAGCTTGATTGCAACCAAGACAACAGGCCATTGGCAAAAGAGCTGGGGATTAAAGTGGTTCCCACTTTTAAAATTCTGAAGGACAACAAGGTTGTAAAAGAAGTTACTGGAGCTAAATACGATGATTTGATTGCTGCCATTGACAATGTTCGATTGAGCTAA 546 0.4194 MALNVCVSPNPKWVASPSLDSGSSLRPSLGSCFGNLNIPSVNLNLSTRTTSLSLRRSFSVRSSLETAGPTVTVGQVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVMAPKFQELSKKYEDVVFLKLDCNQDNRPLAKELGIKVVPTFKILKDNKVVKEVTGAKYDDLIAAIDNVRLS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00518 181 SUPERFAMILY Thioredoxin-like 70 178 IPR036249 -
Vian2g00518 181 Pfam Thioredoxin 76 176 IPR013766 -
Vian2g00518 181 Gene3D Glutaredoxin 60 180 - -
Vian2g00518 181 ProSiteProfiles Thioredoxin domain profile. 62 180 IPR013766 -
Vian2g00518 181 CDD TRX_family 82 176 - -
Vian2g00518 181 PANTHER THIOREDOXIN-LIKE PROTEIN 1 75 176 - -
Vian2g00518 181 ProSitePatterns Thioredoxin family active site. 97 115 IPR017937 -
Vian2g00518 181 PRINTS Thioredoxin family signature 96 104 - -
Vian2g00518 181 PRINTS Thioredoxin family signature 144 155 - -
Vian2g00518 181 PRINTS Thioredoxin family signature 104 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00518 Vian-Chr2 6251542 6254184 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00518 K03671 - gmx:100499776 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00518 2 6251542 6254184 Vian2g00518 2 6251542 6254184 ECH