Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00516 ATGGCTAAAGCTGGCGGGGTTTGGATTTTGCCATTGGTCGCCGCCTGGTGGTGGCTGTCCACGGCGGTGACGGTGAGGGGTTCGAATTCGACGACGATTTACGACGAGCTTCGGGCGCAGGGTCTTCCGGAGGGGCTTCTTCCGAAGGGAATTGCGAAGTATTCGTTGAACGGAACAAGTGGGGAATTCGAGGTGTGGATGCCGGAACCCTGCAACGCCAAGTTCGAGAACGAGGTGCACTACGATTCCAACATAAAGGGTATCCTCGGATTCGGCCGGATCGGGGAATTGTCCGGTATGTCGGCGCAAGAGCTCTTTTTGTGGTTCCCTGTTAAGGGCATTCGTGTGGATGTTCCCACCTCTGGTCTTATACACTTTGATGTCGGTGTTGCGGATAAGCAGTTATCTCTTTCCCTTTTTGAAGACCCTCCTGATTGTAACCCTGAGGTTGGTTTATCATCCTTCAATGTTCTAACGCCTTGTTTGATTTGGGGTTTTTTCCTCCTTTGGGGATCTGAAATTTGTGGGGTTTTCTTGTTGGTCACTACTTGGATGCGTTTCTTTGTGTTGTTAGTGTTGATTTTTGATTGA 591 0.5008 MAKAGGVWILPLVAAWWWLSTAVTVRGSNSTTIYDELRAQGLPEGLLPKGIAKYSLNGTSGEFEVWMPEPCNAKFENEVHYDSNIKGILGFGRIGELSGMSAQELFLWFPVKGIRVDVPTSGLIHFDVGVADKQLSLSLFEDPPDCNPEVGLSSFNVLTPCLIWGFFLLWGSEICGVFLLVTTWMRFFVLLVLIFD 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00516 196 Gene3D - 18 148 IPR036758 -
Vian2g00516 196 FunFam Uncharacterized protein At3g07460 19 151 - -
Vian2g00516 196 PANTHER T31J12.3 PROTEIN-RELATED 25 146 IPR007493 -
Vian2g00516 196 SUPERFAMILY At5g01610-like 11 147 IPR036758 -
Vian2g00516 196 Pfam Protein of unknown function, DUF538 34 141 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00516 Vian-Chr2 6227608 6228198 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00516 - - gmx:100778787 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00516 2 6227608 6228198 Vian2g00516 2 6227608 6228198 ECH