Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00507 ATGGATGTCCGGATGGAGTACATTGCACACATACGCAAGCAGTTGAAAGAAGAAGAAAACGACGAAGCCATGCGTTTTTGCCCGTGCTTTGGATCCGACGAGGCCAAGGCGATCGCCGATCGCGACCCGGTTCTGCTGGTTTCGGGCATGGGCGGCTCCATTGTGAATTCCAAGCCCAAGACATTCGGGTTCACAACCCGGGTTTGGGTCAGGCTTCTGCTCGCTGATATGGAGTTCCGGAAGAAGATTTGGTCCCTTTACAATCCCAAAACAGGCTACTGTGAAACGTTGGACAAGAAGTCTAAGCTTGTGGTCCCTGACGATGATCATGGCCTCTATGCGATCGATATTTTGGATCCATCGTGGTTTACGAAATGCGTGCATTTGACAGAGGTGTATCATTTTCACGACATGATTGAGATGCTTGTTGCATGCGGTTACGAGAAGGGAACCACGCTGTTTGGGTTCGGATATGATTTCCGCCAAAGCAATAGGATTGACAAGTCAATGGAAGGTCTTAAACATAAGTTGGAGACTGCTCACAAAGCTTCTGGTGGAAGAAAAGTCAATTTAATTTCTCATTCCATGGGAGGAATTATGATCTCGTGTTTCATGTCGCTTCACAGAGATGTGTTTACGAAATATGTGAATAAGTGGATTTGCTTGGCTTGCCCTTTCCAAGGAGCCCCAGGGTGCATCAATGATTCTTTATTAACTGGATTAGAGTTTGTTGATGGCTTTCAAAGCTACTTTTTTGTGAAAAGGTGGACTATGCATCAATTGCTAGTGGAGTGTCCATCAGTCTATGAAATGTTGGCAAATCCATCTTATGAGTGGAAAAAGCAGCCAGAAATTCTAGTCTGGCGAAAGCATACAAAGGACGGGGACAATAACACCAATTTGGAATCTTATGGACCAACCCAGAGTATATCTTTATTTGAAGAAGCACTGCGGAATAATGAGCTAAGTTACAATGGGAAAACAATACGGCTTCCCTTTAACTTTGATATCCTTGACTGGGCTATTAAAACACGACAACTTATCGCAAATGCTAAATTGCCAGATGGAGTCAGCTTCTATAACATTTACGGGACATCGTTGGACACACCTTTTGATGTTTGTTATGGTTCGGAAGATTCTCCAATTGAGGACTTATCCGAAATTTGCCACACAATGGTGATCATTTATTCTTCATCGGAAAAAGAGGAAATTTTCACTAATCACCGTATCTACTATAGAAGTGAGAAGATCCTTGCTTTAACCAAGCAATTTGTTGTTGCTGAAATAGAGTCCCATTTGTTGTGGCAAGAGCCTTGGTGA 1320 0.4333 MDVRMEYIAHIRKQLKEEENDEAMRFCPCFGSDEAKAIADRDPVLLVSGMGGSIVNSKPKTFGFTTRVWVRLLLADMEFRKKIWSLYNPKTGYCETLDKKSKLVVPDDDHGLYAIDILDPSWFTKCVHLTEVYHFHDMIEMLVACGYEKGTTLFGFGYDFRQSNRIDKSMEGLKHKLETAHKASGGRKVNLISHSMGGIMISCFMSLHRDVFTKYVNKWICLACPFQGAPGCINDSLLTGLEFVDGFQSYFFVKRWTMHQLLVECPSVYEMLANPSYEWKKQPEILVWRKHTKDGDNNTNLESYGPTQSISLFEEALRNNELSYNGKTIRLPFNFDILDWAIKTRQLIANAKLPDGVSFYNIYGTSLDTPFDVCYGSEDSPIEDLSEICHTMVIIYSSSEKEEIFTNHRIYYRSEKILALTKQFVVAEIESHLLWQEPW 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00507 439 Pfam Lecithin:cholesterol acyltransferase 107 281 IPR003386 GO:0006629|GO:0008374
Vian2g00507 439 Gene3D alpha/beta hydrolase 101 418 IPR029058 -
Vian2g00507 439 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 37 393 - -
Vian2g00507 439 SUPERFAMILY alpha/beta-Hydrolases 40 388 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00507 Vian-Chr2 6113311 6126122 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00507 27 392 Acyl Lipid Metabolism Gene Families AT3G03310 70.000 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00507 K22389 - gmx:100797043 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00507 2 6113311 6126122 Vian2g00507 2 6113311 6126122 ECH