Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00416 ATGGGCGGTATCCTTTCTTCGTTCTTTGGTGGTGGCGGCGGCGATGAGACGTCGTACTCGGAGGGGCCTTCTCGCGTGCTGTCGTTCCACTCGTCGGCGCGATGGCAGCTCCACTTCAACGAGGTCAAAGAATCCAGCCAGCTCCTCGTGGTAGATTTCTCGGCGTCGTGGTGCGGACCTTGCAAATTCATAGAGCCAGCGATTCACGCCATGGCCGAAAAGTTCACTGACGTTAACTTCGTCAAGATTGACGTCGACGAATTATCGGATGTGGCGGGGGAGTTTCAGGTGCAGGCGATGCCGACGTTCGTGTTGTTCAAGGGAGGGAAGATAATTGACAGGGTTGTTGGCGCAAAGAAGGACGAGCTCGAGAAGAAGGTTGAGAAGCATCGAGCTTAG 399 0.5514 MGGILSSFFGGGGGDETSYSEGPSRVLSFHSSARWQLHFNEVKESSQLLVVDFSASWCGPCKFIEPAIHAMAEKFTDVNFVKIDVDELSDVAGEFQVQAMPTFVLFKGGKIIDRVVGAKKDELEKKVEKHRA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00416 132 Pfam Thioredoxin 39 128 IPR013766 -
Vian2g00416 132 ProSiteProfiles Thioredoxin domain profile. 16 132 IPR013766 -
Vian2g00416 132 FunFam Thioredoxin 25 132 - -
Vian2g00416 132 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Vian2g00416 132 Gene3D Glutaredoxin 14 132 - -
Vian2g00416 132 PANTHER THIOREDOXIN 26 129 - -
Vian2g00416 132 CDD TRX_family 38 128 - -
Vian2g00416 132 PRINTS Thioredoxin family signature 57 66 - -
Vian2g00416 132 PRINTS Thioredoxin family signature 96 107 - -
Vian2g00416 132 PRINTS Thioredoxin family signature 49 57 - -
Vian2g00416 132 SUPERFAMILY Thioredoxin-like 40 130 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00416 Vian-Chr2 4817711 4818324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00416 K03671 - gmx:547759 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00416 2 4817711 4818324 Vian2g00416 2 4817711 4818324 ECH