Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00405 ATGCCACTACCATGCAACATGCACTTGTATCTTTGTCTGATGTTATTATATATCCATTCAGTAGTGGTCTTTGCAGCAAAACCTGATGTAGCAAGACACCAATCACAAGGCTGGTTAAACCATGGTGGAGATTTGTTCAACCGAAGACATGCTTCCAAGGAGCGTAAGATCAGTCCCAAAACTGCCCCAGACCTACGTATGAAGTGGAAATTCTATGCTGGCAGAGACATCACTGCAACACCAGCCATATATGATGGTACCCTTTATTTTCCAAGCTGGAATGGTAACATCTATGCAGTTAAAGAAGCTGATGGATCGCTTGTTTGGAAGCAGAACTTGGACAAATTGACAGGTCTGAAAGCACCCGAAGGCCTTGTTAATAACGTAAATTGGACAGTGTCACGCTCAACTCCTACAGTGGCCGGTGATTTAATGATTTTTGGAATGTATGGTCCTGCTGCTGTTATTGCTGTCAAAAGAGAAACAGGTAAGCTTGTGTGGAAGACCATTTTGGATTACCATCCTAAAGCACTCGTCACCATGTCAGGAACATATTACAAAAGAGGTTACTACGTTGGATCATCTTCCTTGGAGTCACTTGTAACCCTTGATGAGTGCTGCACGTTTCGTGGAAGTTTTGTAAAACTTGATTCTGAATCCGGTGACATCTTGTGGAGGACCTATACGATACCAGATAACAATAACAGAAAAGGAGGATATGCAGGAGCTGCCGTTTGGGGAAGTAGTCCTTCCATTGATGAGAAAAGAAATCATGTCTATATTGGCACAGGGAGCCTATATGCTGCCCCATTACGGATACGCCAGTGTCGAGAGAGACAAATTAATCGAACTCAGCCTACTCAACCAGATGAGTGTGTTGAGCCAGACAACCACTCGGACTCAATCTTAGCCCTTGATTTGGATGATGGGAAGATCAAATGGTACCAGCAGTGTGGAGGCTACGATGTGTCAATCTTAGTATGCAGCGCTTCTCCCACACCTGGTCCTGATTGTCCTCCTCAAGCAGACGAACCAGATGTTGATTTTGGTGAGGCACCTATGATGTTGACCGTATATATAAACCGGATCAAGAGAGATATTGTTGTTGCTGTCCAGAAAAGTGGCATAGCATGGGCTTTTGATCGCAATGATGGTCACCTCGTTTGGCATACGGAAGCTGGGCCATATGGGTTGGCAGGAGGTGGATCATGGGGTGCAGCAACTGATGAAAAGAGGGTTTACACGAACATTGTGAATTCTGATGCCCAAAATTTCACGCTCAGACCCTCAAATAAGATTACAACTGCGGGTGGGTGGGTGGCAATGGAGGCTAACGATGGTAGAGTTTTGTGGTCAACAGCAAACCCAGCTAACAGCACTGCTTATGGCCCTGTCAGTGTTGCAAATGGTGTTGTCTTTGCTGGATCCGCTGATAGAATGGGATACATATATGCAATTGATGGAAAGAGTGGGAAAATTTTATGGTGGTATAAAACTGGAGCTAGTGTCTATGGAGGCATGTCAATCAACAAAGGTTGCATCTATGTCGGCCATGGATACAATGCTGCTTATGGGTATACCTTGAACTTAACAGAGGGAAAGTTTCTGTTTGCTTTCTGTGTCTAA 1626 0.4453 MPLPCNMHLYLCLMLLYIHSVVVFAAKPDVARHQSQGWLNHGGDLFNRRHASKERKISPKTAPDLRMKWKFYAGRDITATPAIYDGTLYFPSWNGNIYAVKEADGSLVWKQNLDKLTGLKAPEGLVNNVNWTVSRSTPTVAGDLMIFGMYGPAAVIAVKRETGKLVWKTILDYHPKALVTMSGTYYKRGYYVGSSSLESLVTLDECCTFRGSFVKLDSESGDILWRTYTIPDNNNRKGGYAGAAVWGSSPSIDEKRNHVYIGTGSLYAAPLRIRQCRERQINRTQPTQPDECVEPDNHSDSILALDLDDGKIKWYQQCGGYDVSILVCSASPTPGPDCPPQADEPDVDFGEAPMMLTVYINRIKRDIVVAVQKSGIAWAFDRNDGHLVWHTEAGPYGLAGGGSWGAATDEKRVYTNIVNSDAQNFTLRPSNKITTAGGWVAMEANDGRVLWSTANPANSTAYGPVSVANGVVFAGSADRMGYIYAIDGKSGKILWWYKTGASVYGGMSINKGCIYVGHGYNAAYGYTLNLTEGKFLFAFCV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00405 541 Gene3D - 22 511 - -
Vian2g00405 541 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 34 506 IPR011047 -
Vian2g00405 541 Pfam PQQ-like domain 438 532 IPR002372 -
Vian2g00405 541 Pfam PQQ-like domain 77 314 IPR002372 -
Vian2g00405 541 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 11 541 - -
Vian2g00405 541 SMART ire1_9 200 228 IPR018391 -
Vian2g00405 541 SMART ire1_9 138 170 IPR018391 -
Vian2g00405 541 SMART ire1_9 81 112 IPR018391 -
Vian2g00405 541 SMART ire1_9 250 317 IPR018391 -
Vian2g00405 541 SMART ire1_9 464 498 IPR018391 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00405 Vian-Chr2 4673797 4675699 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00405 - - gmx:102668917 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00405 2 4673797 4675699 Vian2g00405 2 4673797 4675699 ECH