Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00165 ATGCATTCTTCTCCTCGATCGACTAAGCAATGCAAGCAGCGTTACGGCTACAATTTCAAACACTTGATTCGTTTTCTTACAAGAATAATGCATTACCAAGTGGAGCCTGCTGCTGCTGCATGGAACTACCTCATCAGGGTTCGGACCATGGAAGAGGATCAAATGGAGAGAGTGGTTAGGCTGGCCTCTCAGAGTGCTGTGGTGATTTTCAGTATGAGTAGCTGTTGCATGTGCCATGCAATGAAGAGGCTCTTCTGTGGCATGGGGGTTAACCCCACCGTTCATGAGCTTGACCAAGACCCCAAAGGAAAAGACATGGAGAGAGCACTGATGAGGCTTCTTGGAAATGGAATCAACACCACTGCTGCAGTTGTTCCTGTCGTGTTCATTGGAGGAAAACTTGTTGGGTCCATGGACAGGGTTTTGGCTTTCCACATCAGTGGCACCCTTGTCCCTCTTCTCAAACAAGCTGGAGCTTTGTGGCTTTGA 489 0.4826 MHSSPRSTKQCKQRYGYNFKHLIRFLTRIMHYQVEPAAAAWNYLIRVRTMEEDQMERVVRLASQSAVVIFSMSSCCMCHAMKRLFCGMGVNPTVHELDQDPKGKDMERALMRLLGNGINTTAAVVPVVFIGGKLVGSMDRVLAFHISGTLVPLLKQAGALWL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00165 162 Pfam Glutaredoxin 67 135 IPR002109 -
Vian2g00165 162 SUPERFAMILY Thioredoxin-like 55 161 IPR036249 -
Vian2g00165 162 Gene3D Glutaredoxin 48 161 - -
Vian2g00165 162 ProSiteProfiles Glutaredoxin domain profile. 55 161 - -
Vian2g00165 162 PANTHER GLUTAREDOXIN 55 162 IPR011905 -
Vian2g00165 162 NCBIfam glutaredoxin-like family 58 162 IPR011905 -
Vian2g00165 162 CDD GRX_GRXh_1_2_like 66 153 - -
Vian2g00165 162 FunFam Glutaredoxin family protein 55 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00165 Vian-Chr2 1579941 1580621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00165 57 162 Miscellaneous Gene Families AT3G02000 67.925 5.84e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00165 K03676 - gmx:100797942 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00165 2 1579941 1580621 Vian2g00165 2 1579941 1580621 ECH