Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00012 ATGAGTGGGACCCATATCTCCATTTCTTTAACATCTCGTCCATGCTCCTCCTCCTCCTCTCATCGTTTATATACGAATCCTCCCCTTTCCAGAATCAACATCAATGGCAATCAGCCACAGTACTTTGGCCTTTGCTTTCGGCATGCTAGAACAACATTTTACCGAATAGTGAAGAAGAAATCAACCGAGGGATTTCAGTCACTGCCTTACCTGGTGGCATTGTTCAGTTCGATGCTTTGGTTATACTATGCCTTACTAAAAAAAGACGCTTTTCTTCTCTTGACCATTAACTCATTTGGATGTGTGATTGAGATGATCTACATCATCTTGTACATCACCTATGCGGCAAGGGATGCTAGGCTTCCAAATGTACTTGGTTTTGCACTTGGATTAATTCAGATGGTGCTTTATGCCATTTACCGGAATGGCAATAAGAAGGTTGATAAAATGCAAAAGAAGGCACAGGTAGAGCAACTGAAAAGTGGTGAGGTGTTTCATGTGGAGGAAAACGAGCAAGAACAGAAGAAGGAAGAGACTATGGCGGAGAAGGAAAGTGATGAACCTAACGATTGCAGGGTCTAA 582 0.4244 MSGTHISISLTSRPCSSSSSHRLYTNPPLSRININGNQPQYFGLCFRHARTTFYRIVKKKSTEGFQSLPYLVALFSSMLWLYYALLKKDAFLLLTINSFGCVIEMIYIILYITYAARDARLPNVLGFALGLIQMVLYAIYRNGNKKVDKMQKKAQVEQLKSGEVFHVEENEQEQKKEETMAEKESDEPNDCRV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00012 193 PANTHER RAG1-ACTIVATING PROTEIN 1 122 160 IPR047664 -
Vian2g00012 193 FunFam Bidirectional sugar transporter SWEET 34 120 - -
Vian2g00012 193 Pfam Sugar efflux transporter for intercellular exchange 52 117 IPR004316 GO:0016020
Vian2g00012 193 MobiDBLite consensus disorder prediction 1 22 - -
Vian2g00012 193 Coils Coil 167 187 - -
Vian2g00012 193 Gene3D - 43 118 - -
Vian2g00012 193 MobiDBLite consensus disorder prediction 167 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00012 Vian-Chr2 124402 127183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00012 20 161 Miscellaneous Gene Families AT5G13170 28.947 1.04e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00012 K15382 - gmx:100777741 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00012 2 124402 127183 Vian2g00012 2 124402 127183 ECH