Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00006 ATGAAGAGCTCTCTGAAGAAATTGCGAGGTCTGGCGCTTCACAATCACAACCACAACCGCACTCGCAAGGATGACTCCTCCAACTCCATTCAGCCTCTGGGCCAGCTTGACGAGCTTGCTCGGGCCACCCAGGATATGCAAGACATGAGGGACTGCTATGACACCTTGCTTTCCGCCGCCGCTGCAACCGCCAGCAGTGCCTATGAATTCTCTGAGTCCTTGCGAGACATGGGCTCTTGTCTTCTCGAGAAGACCGCTTTAAATGACCACGCAGATGAAACTGGAAAACTTCTCCTCACGCTTGGCAAAATTCAGTTCAAACTCCACAAACTAATAGATGACTACCGTTCTCATATAATTCAGACAATTACCGTTCCCTCGGAGTCTCTCTTGAATGAACTTCGAATTGTTGAGGAGATGAAGCGGCAATGTGATGAGAAAAGAGACGTATATGACTATATGGTAGCAAGATACAGAGAAGGAGGCAGGTCTAAAGGCGGGAAAGGGGAAACTTTTTCTTTGCAGCAGTTGCAAACTGCTCATGATGAATATGATGAAGAGGCTACTTTATTTGTTTTCCGATTGAAATCTCTGAAGCAAGGACAATCGCGTAGTCTTCTAACACAGGCAACGCGTCACCATGCTTCTCAGTTGTGTTTTTTCAAGAAAGCAGTCAAGTCCCTTGAGACAGTAGAACCACATGTAAAATCTGTAACTGAACAGCAGCACATTGATTACCAGTTCAGTGGTCTTGAAGAGGAGGATGGGTATGAAGGTGACGATGGAGATGATGGTGGTGGTGGTTATGATGACAATGATGATGGTGAGCTGAGTTTTGACTATGGACAAACTGAACAAGACCGAGATGTTTCTACGTCACGAAACTCCATGGAGCTGGATCAAGTGGAAGTTACAGCTCCTGGAGGTTTTACATCCGAAACTGCCAAGGAAAACTTAGACAAACTTCAAAGGAATTTGTTTTCCTTTAGGGTTAGGACAGGGAGCCAATCTGCCCCGCTTTTTGCGGATAATAAACCTGATGCAATTGAAAAACTGAGACAGATGCGCCCATCTTTATCTCGGAAGTTTAGTTCATATGTGCTACCCACACCCGTTGATGCTAAGAGTTCAATCTCTTCAAGTTCAAATAATCCAAAACCTTCCAAAGTGCAGGCAAATTTAAGTGAACCTACAAAGAACTTGTGGCATTCATCCCCATTAGAACAAAAGAAACATGAAAAAGATAGCGGTGATGAATTTTCTGGTTCCATTGTCAGAAGTGCTCCGTCAGTACACAAGGAAAGTAACAGTAATACTGCCTCCACGAGATTGCCTCTTCCTCTAGCAGATAATCTTTTATCCTCGAATCGTGATTACATTTCTGCTCACCCTAAAAAGATTAAAAGATATGCCTTTTCTGGCCCATTGACAAGTAATCCTGGGCCTACCAGACCAGTTTTGTTAGAAAGTGTTCAACTGTTCTCTGGACCTCTTTTGCCAAGTTCAATCCCTCAGCCTCGGTCATCATCTCCAAAAGTATCTCCCACTGCTTCTCCCACTCTAGTGTCTTCACCCAAAATAAGTGAGCTTCATGAACTTCCTAGGCCTCCAACCAATTTCCCATCCAATTCAAGGCTTTTAGGTTTGGTGGGACATTCTGGTCCTTTGTTGTCTGGAGGTCAAAAGGTTTCCTCTGCAAATAATTTGGCTGCATCAAGTGCTGCATCTCCATTGCCAATGCCACCTCAGGCCATGGCTCGTAGTTTCTCCATACCTTCTAGTGGGGCTAGAGTTGCAGCATTACATGTTCCTAGAACACTAGATTCTTCTCATGGATCATCTATATCTGAGACTATTGCTTCTCCTCTGATACCACTAGCATTATCTAGTAGTCAGCCATCATCAGATTGCTGA 1914 0.4441 MKSSLKKLRGLALHNHNHNRTRKDDSSNSIQPLGQLDELARATQDMQDMRDCYDTLLSAAAATASSAYEFSESLRDMGSCLLEKTALNDHADETGKLLLTLGKIQFKLHKLIDDYRSHIIQTITVPSESLLNELRIVEEMKRQCDEKRDVYDYMVARYREGGRSKGGKGETFSLQQLQTAHDEYDEEATLFVFRLKSLKQGQSRSLLTQATRHHASQLCFFKKAVKSLETVEPHVKSVTEQQHIDYQFSGLEEEDGYEGDDGDDGGGGYDDNDDGELSFDYGQTEQDRDVSTSRNSMELDQVEVTAPGGFTSETAKENLDKLQRNLFSFRVRTGSQSAPLFADNKPDAIEKLRQMRPSLSRKFSSYVLPTPVDAKSSISSSSNNPKPSKVQANLSEPTKNLWHSSPLEQKKHEKDSGDEFSGSIVRSAPSVHKESNSNTASTRLPLPLADNLLSSNRDYISAHPKKIKRYAFSGPLTSNPGPTRPVLLESVQLFSGPLLPSSIPQPRSSSPKVSPTASPTLVSSPKISELHELPRPPTNFPSNSRLLGLVGHSGPLLSGGQKVSSANNLAASSAASPLPMPPQAMARSFSIPSSGARVAALHVPRTLDSSHGSSISETIASPLIPLALSSSQPSSDC 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00006 637 MobiDBLite consensus disorder prediction 405 420 - -
Vian2g00006 637 MobiDBLite consensus disorder prediction 252 314 - -
Vian2g00006 637 MobiDBLite consensus disorder prediction 499 540 - -
Vian2g00006 637 Gene3D Arfaptin homology (AH) domain/BAR domain 34 254 IPR027267 -
Vian2g00006 637 MobiDBLite consensus disorder prediction 252 280 - -
Vian2g00006 637 MobiDBLite consensus disorder prediction 499 525 - -
Vian2g00006 637 MobiDBLite consensus disorder prediction 284 300 - -
Vian2g00006 637 MobiDBLite consensus disorder prediction 428 446 - -
Vian2g00006 637 MobiDBLite consensus disorder prediction 373 446 - -
Vian2g00006 637 SUPERFAMILY BAR/IMD domain-like 38 237 IPR027267 -
Vian2g00006 637 MobiDBLite consensus disorder prediction 1 31 - -
Vian2g00006 637 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 635 IPR037488 -
Vian2g00006 637 MobiDBLite consensus disorder prediction 1 16 - -
Vian2g00006 637 MobiDBLite consensus disorder prediction 373 404 - -
Vian2g00006 637 CDD BAR 68 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00006 Vian-Chr2 73116 76496 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00006 - - vun:114183484 1035.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00006 2 73116 76496 Vian2g00006 2 73116 76496 ECH