Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00005 ATGGAGAGGAGCATGAGGGTACCTTTTTACGTTCTTGCAATTTTTCTTCTCCTATCAGATCCTTTTGCTGTTATAAATGCAAACTCTGAAGGTGATGCTCTGTTCGCATTCAGAAGAGCTGTGAAAGACCCAAATAACGTTCTGCAGAGCTGGGATCCAACTTTGGTGGATCCTTGTACATGGTTCCATGTTACCTGTGATGATGATAAGAGAGTAACCCGACTGGACCTCGGACATGCAAAACTGTCTGGTCATTTGGTTCCAGAACTAGGGAGGCTCCAGCGCCTTCAGTTTCTAGAACTATACAAGAATGATTTGAAGGGTCCAATACCAAAGGAACTTGGAGACCTCAAGAACCTGGTTAGCTTGGGTCTCTACCAGAATAACCTCACTGGCTCCATTCCCGCCAGCCTGTCCAACCTCTCCAACATCAAATTCTTGCGGCTCAACAGCAACATGCTCACTGGAAGAATACCGAGGGAACTCACTAAGTTGGGAAACCTCAAGATCTTAGACCTATCAAACAACGATCTGTGTGGTACTTTCCCTACATCCGGCTCTTTTTCAAAGTTCTCTGAACAAAGTTTCAAGAATAACACAAGACTTAAAGGACCAGAATTAATGGGATTCGTCAGATATGATACTGGAGAAAGCTGCAAATGA 663 0.4419 MERSMRVPFYVLAIFLLLSDPFAVINANSEGDALFAFRRAVKDPNNVLQSWDPTLVDPCTWFHVTCDDDKRVTRLDLGHAKLSGHLVPELGRLQRLQFLELYKNDLKGPIPKELGDLKNLVSLGLYQNNLTGSIPASLSNLSNIKFLRLNSNMLTGRIPRELTKLGNLKILDLSNNDLCGTFPTSGSFSKFSEQSFKNNTRLKGPELMGFVRYDTGESCK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00005 220 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 194 - -
Vian2g00005 220 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Vian2g00005 220 Pfam Leucine Rich Repeat 167 183 IPR001611 GO:0005515
Vian2g00005 220 SUPERFAMILY L domain-like 29 192 - -
Vian2g00005 220 FunFam Somatic embryogenesis receptor kinase 1 26 212 - -
Vian2g00005 220 Gene3D Ribonuclease Inhibitor 26 209 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00005 Vian-Chr2 69240 70914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00005 1 205 Receptor kinase-like Gene Family AT1G71830 58.537 1.31e-74 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00005 - - gmx:100778819 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00005 2 69240 70914 Vian2g00005 2 69240 70914 ECH