Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04219 ATGGATGTGCCGCTGCGAGATGTTTGTAAATATGTGAATGAAAAAGTAAACGTCATTGGCGTTGTTGTTGAAACCACCTTTGCCAAGAAAACAATGGGCACGGATTATTGTTGTGCCCTCAGAATCATTGATGACACACGACACGATTTTAGCATGGCTGCTAATGTTTTTGGTAAAAGTACCGAAAATCTTCCTCTTGTGGCGGCTTTGGGAGATATAATTCAACTTAGTTTTGTATCGATCCTTCATCATAGTGAGGCTGCGAAAGATGAATGGGTGATCTTTGTCTGGGATGGTACTGATACCCAATCGAATGCAATATGTTCAAACCTAGAAAATGAACTTAAGAATCCACTTCCTTTACAACGGGACCATTTGTCTTTGCCAAGAGATATTTTATGTACTTTTCCAACGGTTGGAACTATCCTTAGAATAATTTTTCATATAGGTGTTGAAAAAAGTCATTTCCACCTTCTAACCATTGGTAAATGGGTAAAAATTAATAATTTGCGTCTTAAGTTGTATGCTGGACTGTGGCATGGTATTTTTACTGTTCAAACAAAGCTTCAATATATATCAAATGAAGATCAGCTTATTGCAGAACGCCAAAGGTTGGCTGACGAGAGGCTATCCTTAATATTAGGAAGAATGCCTAATTTGAGCTTCCCCGAGCCTTCACCGATTACAGTAGTTAATCATCGTGATCATGTGAGACCTGTTACTTTAATGAGTGTCCTCACTCATTCAAAGGTGACGGCTATATTCAAGTGTGTTGTTCGGGTGGTAGCAGCAATGCCTTGCAAAGCTGAAAATCTCCGTTCTTCTACTGGGAAATATAGGATGCGTCTAACACTAGAGGACCCAACTGCCAGAATCCATGCTCTTGTAATTGAAGAGGATGTGGTGACTCTGTTTGATGGTATTCCTGACGCTGAAAAGTTGGAAAGAAAGCTGAATAAATTACTTGGAATATCTGAAGATAATAGTATTGGTGGGGTAAAAGATACTACAAGAAATCCACCTTGGGTTTGTGTTTGTCTCAAGTCATACTATCTCTCCAAAGATGATATCTGGGGCACTAGAAATTTCAGAGTATTTGACACCAAAATTCTGGAAGATTCATCATAG 1128 0.3901 MDVPLRDVCKYVNEKVNVIGVVVETTFAKKTMGTDYCCALRIIDDTRHDFSMAANVFGKSTENLPLVAALGDIIQLSFVSILHHSEAAKDEWVIFVWDGTDTQSNAICSNLENELKNPLPLQRDHLSLPRDILCTFPTVGTILRIIFHIGVEKSHFHLLTIGKWVKINNLRLKLYAGLWHGIFTVQTKLQYISNEDQLIAERQRLADERLSLILGRMPNLSFPEPSPITVVNHRDHVRPVTLMSVLTHSKVTAIFKCVVRVVAAMPCKAENLRSSTGKYRMRLTLEDPTARIHALVIEEDVVTLFDGIPDAEKLERKLNKLLGISEDNSIGGVKDTTRNPPWVCVCLKSYYLSKDDIWGTRNFRVFDTKILEDSS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04219 375 SMART Telo_bind_a_2 2 135 IPR011564 GO:0000723|GO:0000781|GO:0003677
Vian1g04219 375 SUPERFAMILY Nucleic acid-binding proteins 80 176 IPR012340 -
Vian1g04219 375 SUPERFAMILY Nucleic acid-binding proteins 4 95 IPR012340 -
Vian1g04219 375 Pfam Telomeric single stranded DNA binding POT1/CDC13 14 81 IPR011564 GO:0000723|GO:0000781|GO:0003677
Vian1g04219 375 Gene3D - 3 117 IPR012340 -
Vian1g04219 375 PANTHER PROTECTION OF TELOMERES 1 4 83 IPR028389 GO:0000723|GO:0043047
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04219 - - var:108333113 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04219 1 65120316 65123230 Vian1g04219 1 65120316 65123230 ECH