Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04116 ATGACCGAGAAGGTTGCTTATGGCTCATGGTCCACTGGTTTATGTGACTGCTTCTCAGACTGCAGCTCTTGTTGTCTCACTTTTTGGTGCCCCTGCGTTAGCTTTGGAAGGGTGGCGGAGATCCTGGACAAAGGGTCAACTTCTTGTTGTCTTCATGGATCACTGTTCTATATTCTTGCTATTTTTACTCATGTGGGAGGCTGTATCTATTCGTGGGTGTATCGTGCAAAATTGAGGGAGGCGTATGGGATTGAGGGACACCATTGTACTGATTGTTTAGTCAGTTGTTTTTGTCCCCATTTATCCATCTGCCAGGAGTATCGTGAGCTCAAAGCCCGTGGATTTCACATGTCTTCTGGTTGGGATGGAAATGTGCAAATGCAAACGCGTGGCGTGACTTCAGCACCGGCGGTGGAAGGTGGCATGAGCCCTTGA 435 0.4828 MTEKVAYGSWSTGLCDCFSDCSSCCLTFWCPCVSFGRVAEILDKGSTSCCLHGSLFYILAIFTHVGGCIYSWVYRAKLREAYGIEGHHCTDCLVSCFCPHLSICQEYRELKARGFHMSSGWDGNVQMQTRGVTSAPAVEGGMSP 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04116 144 PANTHER DUF614 FAMILY PROTEIN-RELATED 6 119 IPR006461 -
Vian1g04116 144 Pfam PLAC8 family 10 109 IPR006461 -
Vian1g04116 144 NCBIfam uncharacterized Cys-rich domain 9 111 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04116 Vian-Chr1 64198893 64199601 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04116 - - ccaj:109809364 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04116 1 64198893 64199601 Vian1g04116 1 64198893 64199601 ECH