Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04101 ATGAAGGCTAAGCAGCAAGAACGGTCTCTTGCTGCTGTCAATTTCTTCAGTGCTCAATCACACTTATTCAAATTCTTCTCTCATGTTCTTGCATTTGCCTCTGGTTTGCTCATCGGAATCACCATCATCACTTTCTCTCTCAAAAACTTTTCCCCAAACTTTCAATCCCTTCAATCTCTGCCTGCTTCAATCTCAACTTTGCACAATGCTTCAAAAGTCGCCATCTTCACTCCAAACGAGAAGCCTATGCATGACATGACAGAGGAAGAGTTGCTGTGGAGAGCTTCCATGGTTCCTAGGATTAAGGAACTGCCCTACAAACACGTCCCAAAGGTCGCATTTATGTTTCTGACAAAAGGGCCAGTCTTTTTGGGCCCACTCTGGGAGAGATTCTTCAAAGGAAATGAAGGCTTCTATTCCATCTATGTCCATTCTCATCCTTCTTTCAATCAAACACTGCCTCAAACTTCTGTCTTTCATGGCCGTAGAATCCCGAGCAAGGAGGTAAGATGGGGTGATTTCAACATTGTAGGGGCAGAGAGGCGTCTGCTAGCCAATGCTCTGCTCGACTTCTCCAACCAACGTTTTGTTCTTCTCTCAGAATCATGCATTCCTCTGTTCAACTTCTCAACCGTCTATAACTACCTCATCAACTCGACCAAGACCTTCGTAGAATCCTATGATCTCCCAGGTCCAGTGGGGAGAGGCAGGTACAGTCCCAGAATGAGGCCACTGCTTAGGCTTTCTCAGTGGAGAAAAGGGTCCCAATGGTTCCAAATAGACCGTGCTCTCGCAACTGAAATTGTGTCTGACCAACTATACTTCCCCCTGTTCAACAAACATTGCAGGAATGGATGTTATGGTGATGAACACTACTTGCCAACTTTTGTCAGCATCAAGTTTTCGCAGAGGAACTCTGACAGAACTCTGACATGGGTTGATTGGTCTCAGGGCGGACCCCATCCAGCAAGGTTTATGAGAAGGAATGTCACCATTGAATTTCTCAAGAGACTAAGGCATGGAACAACATGTCACTACAATGGGAACACCACCAATATTTGCTACCTCTTTGCAAGAAAGTTCATGCCACAGGCTTTGGATAGATTACTCAGGTTTGCTCCAAAGATAATGCACTTCAACTGA 1143 0.4514 MKAKQQERSLAAVNFFSAQSHLFKFFSHVLAFASGLLIGITIITFSLKNFSPNFQSLQSLPASISTLHNASKVAIFTPNEKPMHDMTEEELLWRASMVPRIKELPYKHVPKVAFMFLTKGPVFLGPLWERFFKGNEGFYSIYVHSHPSFNQTLPQTSVFHGRRIPSKEVRWGDFNIVGAERRLLANALLDFSNQRFVLLSESCIPLFNFSTVYNYLINSTKTFVESYDLPGPVGRGRYSPRMRPLLRLSQWRKGSQWFQIDRALATEIVSDQLYFPLFNKHCRNGCYGDEHYLPTFVSIKFSQRNSDRTLTWVDWSQGGPHPARFMRRNVTIEFLKRLRHGTTCHYNGNTTNICYLFARKFMPQALDRLLRFAPKIMHFN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04101 380 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 50 370 IPR044174 GO:0016757
Vian1g04101 380 Pfam Core-2/I-Branching enzyme 112 338 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04101 Vian-Chr1 64048292 64050980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04101 - - gmx:100815747 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04101 1 64048292 64050980 Vian1g04101 1 64048292 64050980 ECH
Vian1g04101 1 64048292 64050980 Vian8g01464 8 34095923 34099993 PCT