Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04100 ATGGCGGGTTCTTCGATCATGGAGAACCTCTTCCAACGCTCGCTGGAGGATATGATCAAATCCATGCGCCTCCAACTCATCGGTGAAACTACCTTCATCTCCAAGGCCACGGAGGAGATCCGCCGGGAGATCAAATCTACCGACCAGCAAACCAAATCCACTGCGCTCCAGAAGCTCTCTTACCTCTCTGCCGTGCACGGCGTCGACATGTCCTGGGCGTCCTTTCACGTCGTCGAGGTCATGTCCTCCTCCAAGTTCGCGCACAAGAGGATCGGTTACCACGCCGCTTCCCAATCCTTTAACGACGACACGCCGGTGCTCCTACTCATCACCAACCAGCTCCGCAAGGACCTCTCCTCCACCAACGAATTCGAGGTAAGCCTCGCTCTCAATTTGTTGTCGCGAATTGCCACTCTCGACCTCGCGCGCGATTTGACGCCCGAGGTTTTCAAATTGCTCTCCACCACTAAGGTTTTCGTCAGGAAGAAGGCTATCGCCGTGGTTTTGAGGGTTTTCGATAAGTACCCCGACGCTGTTAGGGTTTGCTTCAAGCGCTTGGTTGAGAATCTCGAGAGTTCCGATCCTCTGGTTGTGACCGCCGTGATTGGAGTTTTCTGCGAGCTGGCTGCCAAGGATCCTAGGTCATATCTTCCCTTGGCGCCGGAGTTTTATAGGATTTTGGTTGATTCTAAGAACAATTGGGTTTTGATCAAGGTGCTCAAGGTGTTTGCTAAGTTGGCTCCCTTGGAGCATAGATTAGGGAAAAGGATTGTTGAGCCGGTTTGTGATCACATGAGGAGGTCTGGGGCCAAGTCCTTGGTGTTTGAGTGTGTTAGGACTGTGCTCACTAGCTTGAGTGATTATGAGTCAGCTGTTAAGCTCGCGGTTGAGAAGGTTAGGGAGTTGGTGGTTGATCAGGATCCCAATCTTAGGTATCTTGGGCTACATGCACTTTCGGTTGCTGTACCCAAGCACTTGTGGGCGGTCTTGGAGAATAAGGAAGCGGTGGTAAAGTCGTTGAGTGATGATGATTTGAATATCAAGATTGAGTCTCTGCGATTGTTGATGGCCATGGTATCTGAGAGCCATGTTGCAGATATCTCCAGGGTGTTGCTTAATTATGCGTTGAAATCTGACCCTGGATTTTGCAACGAGATATTGGATTCCATTTTGAGGACATGTTCTAGAAATTTGTATGAGATTGTTGTTGACTTTGATTGGTACGTGTCTCTTCTTGGAGAAATGGCCACGATTCCTAATTGCCAAAAGGGGGAAGAGATTGAAACTCAGCTTGTTGACATTGGCATGAGAGTTAAGGATGCTAGAATGGAGCTCGTTCGGGTGGGGCGTGATCTGTTGATTGACCCGGCATTACTGGGTAATGTGCACTTGCATAGGATATTGTGTGCTGCTGCTTGGGTTGCTGGAGAGTATGTTGAGTTTGCAAGCAATCCCTTTGAACTCATGGATGCACTCCTACAGCCTCGTACCAGTCTCTTGCCACCATCCATTAGAGCAGTTTATATTAACTCTGTTCTTAAAATTTTAATCTTTTGTCTCGACTGCTACCTTTTGCAAAATGATGGTTCTGGATCTTTATATTCTGGTAATTTGGAAGGGGAACAATCAGAGTTGTTTAGTGCAAAAAATGACACTGAGGCTACGAAATTGGCAACTTGTGGAGGTTCAAATTATGAACAGGATGTTGGTTTTAACCCAAGGAATATAGCTGACTCTTCTGAAGATCTCTCTGTTGAAAATGGTATAGATAGAGTTGCTACTCATGGTAAAACATTTACATCTACTCTAGTGGCAGGGAAGAATTTCTTGTACGAATCTATTGTAAGCTTATTGAATAGAATTGAATTAATTTTTGGCCCGCTAATAACAAACCAGGATGTTGAAGTGCTGGAGAGAGCACAAAACATACTTTCCCTTGTTCAGTTGATTAAAGAAGAAATAATTGATAATTCAGTCCAGAGTGTGGACACCGTAGAAAAGAAAGATACTCGAGTTTCAACTATTATCAATTTGATGCGTGATACTTTTACTACAGAACTTGGTCCAGTCTCAGTAAGTGCACAGGGCAGAGTTGCTGTGCCGGAAGGACTAGTTCTTAAAGAAAATCTTGATGAATTACAAGCAATATGTGGTGATACTGAACTATCTTCATCAAGTTCGTTTGCCACGGGGGCCCCTCACGGTATCACTATTTCTGATGGTTCTTCATCTAATCTTCTGCAAAATGAAGAGTTAGGGCCTTTGAATGAATCCACATCCTTGATTGAACATCGTAAGAGGCATGGGTTATATTATCTTCCTTCGGAGAAGAGTGAGATTGTTCCAGATGAGTATCCTCGTGCAAATGATCCGAAGTCAAACAGTAATATAAATGATGAAGCTGCCGAACTAGTCAAGCTGACAGAACAATCACTTATGAAGAAAAGGACAAACCAAACAAAGCCCAGGCCGGTAGTAGTGAAATTGGATGATGGAGATCTGGCACCAATTTCAGTCAAAAGGCCAGAGCCTAGGGACGATTCTCTTTCTGGTGCCATACAAGATGTTCTTCTAGGAAGTGAAAGTGGACCAAGTGTGTCTCAAAGTTACCCTTCTAATAAGTCATCAAGGAAGCAGAAAGAGAAAAAGAAACTAAGCTCGAATGGTCGATCTGAAATGAAGGAAAATGCAGTTGATTCAGAAAAGCCTGACCCTGAAAGAGCAAATTCTAGTAGCAAAAATCATGGTCATAGTAAAGAGAGAAAACACAGAGGAAAAGAAAAGATTGTTGAGGGTGAAGAGCGTGATCAGGAGGGAAAGAAAAAGAGTGGCCACGGCCGTGGTAGGAGAAAAACTCATCACAGAGCGAAGTCACCCTTAAGTGACCCTACTCATATTTTGCACATAAAACAAGTACAGAAATCTTACGTGGAAACTAAAGCTTCTTTGAATACAAAAAGAGAAGAGGAGAAATGA 2976 0.4439 MAGSSIMENLFQRSLEDMIKSMRLQLIGETTFISKATEEIRREIKSTDQQTKSTALQKLSYLSAVHGVDMSWASFHVVEVMSSSKFAHKRIGYHAASQSFNDDTPVLLLITNQLRKDLSSTNEFEVSLALNLLSRIATLDLARDLTPEVFKLLSTTKVFVRKKAIAVVLRVFDKYPDAVRVCFKRLVENLESSDPLVVTAVIGVFCELAAKDPRSYLPLAPEFYRILVDSKNNWVLIKVLKVFAKLAPLEHRLGKRIVEPVCDHMRRSGAKSLVFECVRTVLTSLSDYESAVKLAVEKVRELVVDQDPNLRYLGLHALSVAVPKHLWAVLENKEAVVKSLSDDDLNIKIESLRLLMAMVSESHVADISRVLLNYALKSDPGFCNEILDSILRTCSRNLYEIVVDFDWYVSLLGEMATIPNCQKGEEIETQLVDIGMRVKDARMELVRVGRDLLIDPALLGNVHLHRILCAAAWVAGEYVEFASNPFELMDALLQPRTSLLPPSIRAVYINSVLKILIFCLDCYLLQNDGSGSLYSGNLEGEQSELFSAKNDTEATKLATCGGSNYEQDVGFNPRNIADSSEDLSVENGIDRVATHGKTFTSTLVAGKNFLYESIVSLLNRIELIFGPLITNQDVEVLERAQNILSLVQLIKEEIIDNSVQSVDTVEKKDTRVSTIINLMRDTFTTELGPVSVSAQGRVAVPEGLVLKENLDELQAICGDTELSSSSSFATGAPHGITISDGSSSNLLQNEELGPLNESTSLIEHRKRHGLYYLPSEKSEIVPDEYPRANDPKSNSNINDEAAELVKLTEQSLMKKRTNQTKPRPVVVKLDDGDLAPISVKRPEPRDDSLSGAIQDVLLGSESGPSVSQSYPSNKSSRKQKEKKKLSSNGRSEMKENAVDSEKPDPERANSSSKNHGHSKERKHRGKEKIVEGEERDQEGKKKSGHGRGRRKTHHRAKSPLSDPTHILHIKQVQKSYVETKASLNTKREEEK 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04100 991 MobiDBLite consensus disorder prediction 860 874 - -
Vian1g04100 991 Gene3D - 4 553 IPR011989 -
Vian1g04100 991 MobiDBLite consensus disorder prediction 924 943 - -
Vian1g04100 991 Pfam Adaptin N terminal region 31 493 IPR002553 GO:0006886|GO:0016192|GO:0030117
Vian1g04100 991 MobiDBLite consensus disorder prediction 859 973 - -
Vian1g04100 991 PIRSF AP3_delta 1 991 IPR017105 GO:0015031|GO:0030123
Vian1g04100 991 MobiDBLite consensus disorder prediction 885 915 - -
Vian1g04100 991 PANTHER DELTA ADAPTIN-RELATED 1 964 IPR017105 GO:0015031|GO:0030123
Vian1g04100 991 SUPERFAMILY ARM repeat 30 662 IPR016024 -
Vian1g04100 991 MobiDBLite consensus disorder prediction 810 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04100 Vian-Chr1 64040473 64044286 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04100 K12396 - gmx:100815221 1547.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04100 1 64040473 64044286 Vian1g04100 1 64040473 64044286 ECH