Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04074 ATGAACATTTGTAGTTTTTGGGTGTCGTCCATGAAAATCCCCTTTCACGGGTGTCGATTCTCAAGGCCCTTCTTCTCTCTATCTTCTTCGTCTCGCAATCGCATTATGACCATTCAAAGTTCTTCTTCTTCTACTTCTTCTGCTTCCATATCAACCGAGTCCAAAGAGAAGAAGAAGGAAAATTTACCTTGGTTAATCGTTGGCCTCGGCAATCCAGGCAAAAAGTACGCTGCCACTCGCCACAATGTGGGCTTTGAGATGGTTGATGCCATAGCTGAAGCTGAAGGGATATCTATGAACACTGTTTCCTTCAAAGCTTTATTTGGGAAAGGTTTAATAGGTGATGTCCCAGTCATACTTGCAAAACCACAGACTTTTATGAATTCTAGCGGTGAATCTGTTGGGGCCATAGTTTCGTACTACAAGATTCCACTAAAGCAAGTACTTGTGATCTTTGATGACTTGGATTTACCTTTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGCCACAATGGAATGAAGAGTGTTATTAATCATTTCAAAGGGAATACTGGTTTTCCTCGTTTAAGAATTGGCATCGGACGACCTCCCGGTAAAATGGATCCTGTAGCATTTGTTCTTCGCACGTTCACTAAACAGGAAAGAGAAGAGTTGAGTTTTACATTACAAGATGGAATAGAAGCTCTTCGGATTCTTTTGCTGGAAGGATTTGATAAAAGTGCAACATTTGTTAATAGTGCCAAAAAGATAGAGCAAACAGGTTGA 774 0.4121 MNICSFWVSSMKIPFHGCRFSRPFFSLSSSSRNRIMTIQSSSSSTSSASISTESKEKKKENLPWLIVGLGNPGKKYAATRHNVGFEMVDAIAEAEGISMNTVSFKALFGKGLIGDVPVILAKPQTFMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNTGFPRLRIGIGRPPGKMDPVAFVLRTFTKQEREELSFTLQDGIEALRILLLEGFDKSATFVNSAKKIEQTG 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04074 257 SUPERFAMILY Peptidyl-tRNA hydrolase-like 63 248 IPR036416 GO:0004045
Vian1g04074 257 Gene3D - 48 251 IPR036416 GO:0004045
Vian1g04074 257 PANTHER PEPTIDYL-TRNA HYDROLASE 52 248 IPR001328 GO:0004045
Vian1g04074 257 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 169 179 IPR018171 GO:0004045
Vian1g04074 257 Pfam Peptidyl-tRNA hydrolase 65 243 IPR001328 GO:0004045
Vian1g04074 257 Hamap Peptidyl-tRNA hydrolase [pth]. 63 241 IPR001328 GO:0004045
Vian1g04074 257 FunFam Peptidyl-tRNA hydrolase 61 251 - -
Vian1g04074 257 NCBIfam aminoacyl-tRNA hydrolase 64 233 IPR001328 GO:0004045
Vian1g04074 257 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 76 89 IPR018171 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04074 Vian-Chr1 63798551 63801578 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04074 K01056 - gmx:100526866 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04074 1 63798551 63801578 Vian1g04074 1 63798551 63801578 ECH