Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04072 ATGGCCTCTTGTGCATCTTCGTCTTGGCTTGTGCTCTCATCCACCAACGCTAAACACAAACCCAGCTGCTTCAAATTCAATGCTCCCATCGCTTCACAAATCCAATGGCATTCAGAGTCGTATACCCAAAGAAACCTCCGTCACCCTCCCGAAATTAAACGCCATTGGGTGGAAGCATCTGATGAATCTTTAGATTCTCCGGAAAGATTCACAGTGGCCTCTTACAACATACTGGGGGATAGGAATGTTTCTCAACACTCGGATTTATACGTAAACGTTCCTTCTCGTTACATCAAATGGGATCGTCGCAAGAGGGTTATTTCTGATGAGCTTCTTGGATGGGACCCTGATATTATCTGCTTACAAGAGGTGGATAAGTATTTGGAACTTTCAGACATTATGGTTAAAGCAGGATATGCTGGATCTTATCAGAGACGCACGGGAGATTCAGTTGACGGATGTGCCATGTTCTGGAAAACTGATAAGTTCCGGTTACTAGAAGGAGAGAACATCAAATTTAAGGACATTGGCCTTCGTGATAATGTTGCCCAACTATCAGTTTTTGAGATTCGTTTTCTCTCGTCAAGAGCACATTATCTCTCTGAGAAATGGGGTAATACCCCTGTTGTGCTAGCTGGTGATTTTAATAGTACTCCTCAGAGTGGAATATATAAGTTTTTGTCATCATCTGAGCTTAATGTCAAGCTGTATGACAAAAAGGAATTATCTGGACAGAAACGGTGTCGTCCTGCTCAAGTAATAGGGGAGAATAAAGAAACAGTTGGTCCAGTTGTCACCCTAGACGGCTTGTTAAAATGTTGGACAGATGAAGAGATAAAAATAGCCACCGGAGATTCTCAGCATCATTTGGCTGTGCATCCATTGAAGCTGAAAAGTTCGTATGCCACAGGTTCAAAAAGTACACGGGGATTCAATGGTGAACCGTTGGCAACTTCCTATCACTCAAAGTTTCTTGGCTCTGTAGATTACTTATGGTACTCGGACGGTATTGTACCTATAAGAGTTCTTGATACCGTTTCAATAAGTGATCTCCTGAGGGCAGGTGGCCTCCCATGCAAGAAGGTGGGAAGTGATCATTTGGCCTTGGTTTCTGAATTTACTTTCTCAGTTACAAACAATGAACCTACAGACAAAGTGGCAGTAGGAGCAGCAGCACCAGCTATAGTAGATATTGAAGAGCCTAACAATCAGCAGTCATAA 1221 0.4283 MASCASSSWLVLSSTNAKHKPSCFKFNAPIASQIQWHSESYTQRNLRHPPEIKRHWVEASDESLDSPERFTVASYNILGDRNVSQHSDLYVNVPSRYIKWDRRKRVISDELLGWDPDIICLQEVDKYLELSDIMVKAGYAGSYQRRTGDSVDGCAMFWKTDKFRLLEGENIKFKDIGLRDNVAQLSVFEIRFLSSRAHYLSEKWGNTPVVLAGDFNSTPQSGIYKFLSSSELNVKLYDKKELSGQKRCRPAQVIGENKETVGPVVTLDGLLKCWTDEEIKIATGDSQHHLAVHPLKLKSSYATGSKSTRGFNGEPLATSYHSKFLGSVDYLWYSDGIVPIRVLDTVSISDLLRAGGLPCKKVGSDHLALVSEFTFSVTNNEPTDKVAVGAAAPAIVDIEEPNNQQS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04072 406 Coils Coil 406 406 - -
Vian1g04072 406 Gene3D Endonuclease/exonuclease/phosphatase 43 194 IPR036691 -
Vian1g04072 406 Gene3D Endonuclease/exonuclease/phosphatase 195 391 IPR036691 -
Vian1g04072 406 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 42 189 - -
Vian1g04072 406 SUPERFAMILY DNase I-like 63 378 IPR036691 -
Vian1g04072 406 Pfam Endonuclease/Exonuclease/phosphatase family 73 366 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04072 Vian-Chr1 63778051 63787589 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04072 - - gmx:100779393 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04072 1 63778051 63787589 Vian1g04072 1 63778051 63787589 ECH