Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03927 ATGGCTTCGTCTGCCTTCACTTCGGTTCCTCTCTCTTCTTCTTCTCTCAATGTTCCTCATTCTTCTTCCAAACTCCCTTCCAATTTTCTATCTTCTCCCATTGGCGCATTCTCTCGTGGTCCCAAATTTCTCTTTGCAGAACCAAGATACCATTTTCACCCAAAGGGAAACGCTTCTAAATTTTCCATTGCTGCCCAAACCCTAGACTTCTCCGATTCGTTCTTCGAAGGGGGTTTCGGCTCCGAAGACGACCCCAATTCACCAGGCGGAACCGGGTTCACGGCCGTCGAGGAAAAGGAGGAGCCCCCCTGCCCACCCGGCCTTCGACAGTACGAGACAATGATGGTTTTGAGGCCCGACATGACCGAGGATGAACGACTTGCACTCACCCAGAAGTACGAGGAGATTCTTGTTGCTGGAGGTGGCATGTATGTAGAGGTTTTTAACAGAGGAGTTATTCCTCTAGCATATGGGATCAAGAAGAAAAACAAAGCTGGGGAGACCAACACTTATTTGGATGGCATCTACCTGCTGTTCACCTACTTCACCAAGCCTGAATCCGTAAAGCCTCTCGAGGACACAGTGTTAACGGATGATAATGTTATCCGATCAATGAGTTCCAAAGTTAGGAAGAGGAAATATTAG 645 0.4806 MASSAFTSVPLSSSSLNVPHSSSKLPSNFLSSPIGAFSRGPKFLFAEPRYHFHPKGNASKFSIAAQTLDFSDSFFEGGFGSEDDPNSPGGTGFTAVEEKEEPPCPPGLRQYETMMVLRPDMTEDERLALTQKYEEILVAGGGMYVEVFNRGVIPLAYGIKKKNKAGETNTYLDGIYLLFTYFTKPESVKPLEDTVLTDDNVIRSMSSKVRKRKY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03927 214 MobiDBLite consensus disorder prediction 1 26 - -
Vian1g03927 214 SUPERFAMILY Ribosomal protein S6 108 212 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vian1g03927 214 Gene3D - 107 214 IPR014717 -
Vian1g03927 214 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 99 214 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vian1g03927 214 Hamap 30S ribosomal protein S6 [rpsF]. 108 211 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vian1g03927 214 FunFam 30S ribosomal protein S6 alpha, chloroplastic 107 214 - -
Vian1g03927 214 CDD bS6_chloro_cyano 108 209 - -
Vian1g03927 214 Pfam Ribosomal protein S6 110 206 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vian1g03927 214 MobiDBLite consensus disorder prediction 79 106 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03927 K02990 - gmx:100500072 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03927 1 62336501 62338141 Vian1g03927 1 62336501 62338141 ECH