Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03923 ATGGGGTGTGCTTCCTCTAAGGGTATGGATGTGGCAGCGGTCCCTTACCGGCCGGCGCCGACGAGCTTCGCGGTGTTCGACATAAACGCGATAGAGGAGCCATGGCTGAAGCACCTGAACGAGACCTCCACCCAAATCCACCAAGACAAAACCCCTCTCCCCGCTCCTATCCTCCACAAACTCAACATGCTCGACGCCACCGACGCCCCTCAATCATGGGAGGAGGTCAGCAAAACACTCCAAGACCTCAAACCCGTCATCACCAAACCTCCTACCACCTCACCGCCTCCGCAGCCTCAACCTCAACCTCCGCAAAAAACTAACTCCTTCCACACACTCGAAGAGTTAGACTCCAAGTTAAAGCCCAAGCCCCAAGCAAAAGAGCCCGACGCAGTGAAGCCCGAAACAGTAAAACCCGTTGTGGCTAACGTGACCGTGGCGCGAGGGAGCAAGCTGAAGGACAACGTGTTCATAGTGCGGGACAGGTTGGAGAGAGAGAAGGAGGAGAAGGAGTCGGCGTTCGAGCGGCTTCGGCGGGATCCACTGAGCGCGTTTCCGGAGAAGTGTCCGCCGGGGGGGAGCGAGACGGTGGTGGTGTACACGACGTCGTTGCGGGGCGTGAGGAAGACGTTCGAGGACTGCAACAGGGTGCGCGACGTGCTGGAGACGCAGCGCGTGGTGTTCGACGAGCGCGACGTGTCGCTGCACGGGGAGTTTCTCCGGGAGGTGAAGGAGCTGGTGGGAGAGGCGGTGGCGCTTCCGCGGGTGTTCGTGAAGGGGAGGTACGTGGGGGGCTTGGAGGAGTTGGCGGAGCTGAACGAGACGGGTCGGCTGGGGAGGATACAGAGGGCCACACGTATGGAGAGGGGGATTGGGAGGCAAACGTGTGGAGGATGTGGTGGGGCCCGGTTTGTGCCTTGTTTGGATTGTGGTGGGAGTTGCAAAGTTTTGGTGGATGGAATAGACAAACAGAGGTGTCCCAAGTGTAATGAGAATGGCTTGGTTCATTGCCCTTCTTGTATTTGA 1026 0.5887 MGCASSKGMDVAAVPYRPAPTSFAVFDINAIEEPWLKHLNETSTQIHQDKTPLPAPILHKLNMLDATDAPQSWEEVSKTLQDLKPVITKPPTTSPPPQPQPQPPQKTNSFHTLEELDSKLKPKPQAKEPDAVKPETVKPVVANVTVARGSKLKDNVFIVRDRLEREKEEKESAFERLRRDPLSAFPEKCPPGGSETVVVYTTSLRGVRKTFEDCNRVRDVLETQRVVFDERDVSLHGEFLREVKELVGEAVALPRVFVKGRYVGGLEELAELNETGRLGRIQRATRMERGIGRQTCGGCGGARFVPCLDCGGSCKVLVDGIDKQRCPKCNENGLVHCPSCI 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03923 341 Gene3D Glutaredoxin 195 288 - -
Vian1g03923 341 MobiDBLite consensus disorder prediction 89 104 - -
Vian1g03923 341 CDD GRX_GRX_like 197 337 - -
Vian1g03923 341 Coils Coil 160 180 - -
Vian1g03923 341 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 75 340 - -
Vian1g03923 341 MobiDBLite consensus disorder prediction 85 109 - -
Vian1g03923 341 Pfam Glutaredoxin 197 263 IPR002109 -
Vian1g03923 341 ProSiteProfiles Glutaredoxin domain profile. 185 289 - -
Vian1g03923 341 SUPERFAMILY Thioredoxin-like 190 279 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03923 Vian-Chr1 62313025 62314050 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03923 K17479 - gmx:100809536 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03923 1 62313025 62314050 Vian1g03923 1 62313025 62314050 ECH