Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03919 ATGGAGATTTTCTCTCTTTTCTCCGAACCGTCCTACGTCGCCGTTGCCGTGACTGCTCTCTGTTTTCTCCTCGCGCTTTACTCTCTCCTCCGATCGTTTTCCCTTCCACGGAGATTCACTCCGCCGAGGAAGCACCACTGCGATTGCGCCTCCGATTCAGCGTCCGTGGCCGCTTCAGGCGCCGTGCCCTACCTCAACGGCGCCGTTGAAATGCTTGAGCCCAGTCCCGTTCCGGCGCCTGTGGTCTTGGGGGAGCGGTTGACGGGGTCTTCCATGATGGAGGAACTGGTTCCGGAGATTACGACGCACGCGCTCAGTTACTTGGATTATCCCAGTCTCTGCCGTCTCTCCATGACCAATTCTTTGATGCGAAAGGCCGCGAATGATGATAACGCTTGGAAGGCCTTGTATCACAAGGACTTTACATTGGAACAAGATAGTATCACACCCACCAATGGGTGGAAGGCGTACTATGCTGCAACAAGAGCAATTGTGAATATTAATACAGAATTCTTCAATATTGTAAGAGATAAGTCTCTTCCGGCAATGAGTCGTTTTTGGCTGAATGCAGATTATGTGAAGTGCATTCATGCCTCAGGAGAACTCTTTTCCGGGTTTAATGCAGTAATGCAGAGTTGGCAACTAGTATTCAACTGGGAGCAAGGATTGAATTTTCAGGTTCGAGATGTGCGCGCTCGCGTCTTGGCAGACATGGCTTGGGTTACCATGAGAACATATGTTGACATGGATACAGGGCCATTCAATGTGACAAATGTTTTTGAGTTCCATAATGGACGGTGGTATATGGTTCATCATCACAGTTCTATGATGAATGGGGATGTGGACCATCAGATAGTGCATGGATAA 867 0.4925 MEIFSLFSEPSYVAVAVTALCFLLALYSLLRSFSLPRRFTPPRKHHCDCASDSASVAASGAVPYLNGAVEMLEPSPVPAPVVLGERLTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSITPTNGWKAYYAATRAIVNINTEFFNIVRDKSLPAMSRFWLNADYVKCIHASGELFSGFNAVMQSWQLVFNWEQGLNFQVRDVRARVLADMAWVTMRTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSMMNGDVDHQIVHG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03919 288 Gene3D - 155 284 - -
Vian1g03919 288 ProSiteProfiles F-box domain profile. 90 136 IPR001810 GO:0005515
Vian1g03919 288 CDD F-box_FBXL4 94 139 - -
Vian1g03919 288 SUPERFAMILY NTF2-like 159 277 IPR032710 -
Vian1g03919 288 Pfam SnoaL-like domain 165 278 IPR037401 -
Vian1g03919 288 PANTHER F-BOX PROTEIN SKIP8 6 287 IPR044260 -
Vian1g03919 288 SUPERFAMILY F-box domain 87 163 IPR036047 GO:0005515
Vian1g03919 288 Gene3D - 84 134 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03919 - - gmx:100807571 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03919 1 62293627 62297104 Vian1g03919 1 62293627 62297104 ECH