Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03910 ATGGCTCTAAATCTCTGCACTCCATGCTTCTCTCGCCTACTCCATCACCCTTCTTCTTCTCTCCCCAAACTCTCCGAAACCTGCGTTAACCACGCCGCCAATAGCAACGCTCCTTTTCCCTCTCTATTTTTCACCTCTCCCTCTCTTTCCAACCTATCGCGATTACTATATTCCAAAGCCTCCGTCAGCGAGAGCCACAACGAAACCTCCGACGATACCGCCAACATACTCGACCAACAGCTCCTACTCCGAGTCGCTGCGAACGCCAAAGACGCCGATGAGGCCTTGCAGATTATCGCCGACAATTCCACCCGCTACGGCGGCATCGTTTCCACCTCTGACTGCTGCTCAGTCATATCCGCTGCGCTTAACCGCAACAATCCTGAACTCGCTCTCTCCATCTTCTACGCCATGCGCGCCAGTTTTCATCCAGTTGACGAGAGTGGTCCCCTGGCTGCGAGATGGAAGTGGTCGCGGCCAAATGCAAATGTTTATGCACTGTTGATTCAGGGTTTAGCGGCGGTGTTAAGGGTTTCTGACGCTCTTAGGGTGATTAAGTATATTTGTGAGGTTGGCGTTTCACCTGGTGAGGAGGTACGTTTTGGGAAGGTAGTGAAATGTCCTAGTTGTCGGATTGCTGTTGGTGTTGCACAGCCACAACAAGGTATTCAGATAGTGTCGTGTTCCAAGTGTCGCTACCAATACGAACTTGTTTCAGGTGACATAGTCAGTATTGAATCAGAAGAAATCAGCATGGACATATCGGCATGGGAAAGGGCATTAAGTTACGTGAAACTGAGGAAGCAAAGCATTCCCTCTGCTGTTCACTCTATTGTGGTGCAGACCCCTTCTGGTATGGCTCGCACTCATAGATTTGCAACTGAAACAGTTGATCTGCCAGCACAAGAAGGAGAAAGGGTAACTATTGCTGTGGCAGCTCCATCAAATGTATATAGAAAGGTGGGCCCCTTTAAATTCAGTCCAAGGAACCCTGATTTCTATCCAGCTGAAGCTATGTGCATAACAAACCACAAAGATGGGCGGGAGTCACTACTGTTAAGAGCCCCACGAAAAGAAGAAAATTCTTCATTGCTGAAACCCTCCTTCCTTTTTCCACTTATCGCTTTGTTGGCAACCGGGGATGCTGCCTCTGGACTTGTTGACCCTGGCCTTCCCCAGTTACTATCAGTTGTTGCAGTTTCAACCGTTGTTGTTGGGTCTACGTTGAACACTGTTGTTCTTCCCCAGTTTAATCAGCTTCCACAGAAATCAGTAGATGCAGTTGCGATCAAACAACGACTTTTATCTCAATATGATGTTCTTCTGTCTCGCATTAATGACCTCAAAGAAGCTGCTGAAAAAGAGATTTGGATGCTAGCTCGAATGTGCCAACTTGAGAATAAAATTTCAGCTGTTGGAGAACCTGCTTATCGGACTCGGAAAAGTAAAGTCAAGAGGGTGCGAGAGAGTCTGCAAAACTCCCTTAGAGGACGGATTGAACTTATTGATAGCTATGCTAGGATTTCCTCAATGATTGAAATCGAAGTGGAGATGGAGACTGATGTTCTTGCTGCTGAAACTGCTAGTAATATGGACAGTATCTCAGAACAGATAGAGCAAATCATGGAGCTTGAAAATTTGGAGGAGGGATGGAAAATTCAAGCAGAAGCCAATGATGAGGCTGAAAGACTTCTTAGTTCCCAGCCCATGCCTTTGGACGAAGTTTGA 1728 0.4699 MALNLCTPCFSRLLHHPSSSLPKLSETCVNHAANSNAPFPSLFFTSPSLSNLSRLLYSKASVSESHNETSDDTANILDQQLLLRVAANAKDADEALQIIADNSTRYGGIVSTSDCCSVISAALNRNNPELALSIFYAMRASFHPVDESGPLAARWKWSRPNANVYALLIQGLAAVLRVSDALRVIKYICEVGVSPGEEVRFGKVVKCPSCRIAVGVAQPQQGIQIVSCSKCRYQYELVSGDIVSIESEEISMDISAWERALSYVKLRKQSIPSAVHSIVVQTPSGMARTHRFATETVDLPAQEGERVTIAVAAPSNVYRKVGPFKFSPRNPDFYPAEAMCITNHKDGRESLLLRAPRKEENSSLLKPSFLFPLIALLATGDAASGLVDPGLPQLLSVVAVSTVVVGSTLNTVVLPQFNQLPQKSVDAVAIKQRLLSQYDVLLSRINDLKEAAEKEIWMLARMCQLENKISAVGEPAYRTRKSKVKRVRESLQNSLRGRIELIDSYARISSMIEIEVEMETDVLAAETASNMDSISEQIEQIMELENLEEGWKIQAEANDEAERLLSSQPMPLDEV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03910 575 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 574 - -
Vian1g03910 575 Gene3D Tetratricopeptide repeat domain 80 199 IPR011990 GO:0005515
Vian1g03910 575 Coils Coil 431 451 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03910 - - gmx:100781803 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03910 1 62210639 62215292 Vian1g03910 1 62210639 62215292 ECH