Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03896 ATGACGGAACCACCAAAAGCCGATATCCATAACCGCCACGACGAGGATGCAGATGCCGGAGCTGCTTTCGTTCTCCAATCCAAAGGTCAGTGGTGGCACGCGGGGTTCCACCTAACAACTGCGATCGTCGGACCAACAATTCTGACTCTGCCTTACGCGTTCCGAGGATTAGGGTGGGGACTTGGATTCTTGTGCCTAACGACCATGGGAGTTGTTACCTTCTACTCCTATTTCCTCATGTCCAAAGTTCTCGATTACTGTGAAAAATCCGGTCGCCGACACATCCGTTTCCGAGAACTAGCAGCTGATGTTTTAGGGTCAGGATGGATGTTTTATTTTGTAATCTTCATTCAAACGGCAATCAACACTGGCGTTGGCGTTGGAGCAATCTTGCTTGCGGGTGAATGCCTTGAGATCATGTACTCCAATATTTCAGTTCATGGATCCCTCAAATTGTACCACTTTATAGCAATGGTGACAGTGGTAATGATAGTTTTATCTCAGCTTCCTTCTTTCCATTCCCTGCGACACATCAACTTGTGTTCACTACTTTTCGCCCTTGGCTATACCCTACTCGTGGTTGTTGCCTGTATTCATGCAGGTACTTCAGAAAATGCCCCTCCAAGAGACTATTCTTTAGAACCTAAGAAGTCTGCAAGGACCTTCAGTGCCTTCACGTCCCTCTCCATACTTGCAGCAATATTTGGGAATGGCATATTACCCGAGATACAAGCAACTCTGGCTCCCCCTGCCACTGGGAAGATGGTAAAAGGCCTTATTATGTGTTATACAGCAATTTTTTTTACTTTCTACTCTGCAGCAGTTTCTGGATATTGGGTGTTTGGAAACAAATCCAACTCAAACATTTTAAAGAGTCTGCTACCAGATAGTGGACCTTCTTTGGCCCCAACTTGGGTTCTTGCACTTGCAATCACCTTTGTTCTTCTTCAGCTCTTTGCCATTGGCCTGGTTTATTCTCAAGTTGCTTATGAGATAATGGAGAAGAAATCAGCTGATGTGAGGCAGGGGATGTTTTCCAAAAGAAATCTCATTCCTCGCATTATTCTCAGAACAATTTACACGATATGCTGTGGGTTTTTGGCAGCCATGTTGCCATTTTTTGGAGACATCAACGGTGTGGTTGGTGCTGTTGGTTTCATCCCTTTGGATTTCATTCTGCCGATGCTTATGTACAACATGACATACAAGCCTCCAAAATCATCCTTAACTTACTGGATCAACCTCTCAATTATAGTGGTGTTCACGGGTGCTGGAATCATGGGTGCATTCTCTTCCATAAGGAAATTGGTTCTTGATGCCAACCAGTTTAAGCTATTCAGCAGTGATGTTGTGGATTGA 1359 0.4467 MTEPPKADIHNRHDEDADAGAAFVLQSKGQWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFLCLTTMGVVTFYSYFLMSKVLDYCEKSGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAGECLEIMYSNISVHGSLKLYHFIAMVTVVMIVLSQLPSFHSLRHINLCSLLFALGYTLLVVVACIHAGTSENAPPRDYSLEPKKSARTFSAFTSLSILAAIFGNGILPEIQATLAPPATGKMVKGLIMCYTAIFFTFYSAAVSGYWVFGNKSNSNILKSLLPDSGPSLAPTWVLALAITFVLLQLFAIGLVYSQVAYEIMEKKSADVRQGMFSKRNLIPRIILRTIYTICCGFLAAMLPFFGDINGVVGAVGFIPLDFILPMLMYNMTYKPPKSSLTYWINLSIIVVFTGAGIMGAFSSIRKLVLDANQFKLFSSDVVD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03896 452 PANTHER OS05G0424000 PROTEIN-RELATED 30 421 - -
Vian1g03896 452 Pfam Transmembrane amino acid transporter protein 28 433 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03896 Vian-Chr1 62100741 62105741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03896 1 452 Organic Solute Cotransporters AT5G41800 78.540 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03896 - - gmx:100815232 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03896 1 62100741 62105741 Vian1g03896 1 62100741 62105741 ECH