Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03894 ATGAGAACCGATTATTTGAAGCAGAACTTCCCCTTCCCCCACAGAAACATCTTCCTCAAGTTGCTTCTCACCCTCTTCTTCGTAGGCCTCGCTTTCCGTATTCTCTTCTTTCACTCCCTGCCCTCGCAGATTTCCCCTGTTCTCGAATCCCCATTTCCTCAAAAAGCCACCTTATCAGAGCCCCACAATTCTCCTCACTCTGCAGCTCTTTCACAACCACTTTCCGAACCTCCACCTGTTCTGGAACGTATTCCCGAACCTCCACCTCTTCTGGGTCGTCTTCCCGAACCCCCACCTCTTCTGGAATTCGTTTCTGAAACTGAAGATCAGCTCCCTCCCACAGAATCAGAACAATGTGATTACTTTAACGGGGATTGGGTTCCGAACCCGTCTGGTCCAACTTACACCAACGAAAGCTGCGACCTTATTGAAACTCATCAAAATTGCTTGAAGAATGGAAGGCCTGACAGAGAGTTTCTGTATTGGAGGTGGGCTCCTAGACAGTGTGATTTGCCTCAGTTTGATCCAAAGAGGTTTCTCAACATGATGCGGAACAAAGCCTGGGCATTCATTGGTGATTCCATTTCCCGCAACCATGTTCAATCCCTGCTTTGCATTCTCTCCCAGGTGGAAAAACCTGTCTTAGTCTACCATGATGAGGAGTACAAGAGCAAAAGCTGGAACTTCCCCTCATACAACTTCCGTATATCAGTGATTTGGTCTCCATTCCTTGTGGAAGCTGCTATATTTGAAGACATAAATGGAGTTTCGAGTTCTGAAGTGGAGCTACATCTTGACAAACTGGACAGTAAATGGACGGATCAATACCTGGACTTTGATTACATCATTATTTCAACCGGGAAATGGTTTCTGAAATCTGCAATCTACTATGAGAATGACACCATATTGGGTTGCCACTCCTGTCCTAAGAGGAACCTGACAGAGCTGGGATTTAACTTCGCATACCGCAAAGCCTTAAAATTTGTGATGAACTTCGTAGTTTCTTCAAATCACAAAGGAATGGTCTTTTTCAGGACATTCACAGCTGATCATTTTGAAAATGGGGAGTGGTTCAGTGGGGGAACTTGCAATAGAACAGCACCAATTAAAGAAGGTGAGATGGAAAGGAAATATTTGAACCAGATGCTCCGTGACATAGAGTTAGATGAGGTTGGAAAAGCAGCTTCTGAAGCTTCAAAAAATGGTGTGAATTTTAAGCTTGTGGATTTCTCTGCACTATCACAATTGAGACCTGATGGACATCCTGGTCCATACAGGCAATTTCAACCATTTGCAAAGGAGAAAAAGGCTAAAGTTCAGAATGATTGTTTGCATTGGTGCTTACCAGGGCCAATAGACACTTGGAATGATATAATAATGGAGATGATTGTGAAGGGGTGA 1401 0.4418 MRTDYLKQNFPFPHRNIFLKLLLTLFFVGLAFRILFFHSLPSQISPVLESPFPQKATLSEPHNSPHSAALSQPLSEPPPVLERIPEPPPLLGRLPEPPPLLEFVSETEDQLPPTESEQCDYFNGDWVPNPSGPTYTNESCDLIETHQNCLKNGRPDREFLYWRWAPRQCDLPQFDPKRFLNMMRNKAWAFIGDSISRNHVQSLLCILSQVEKPVLVYHDEEYKSKSWNFPSYNFRISVIWSPFLVEAAIFEDINGVSSSEVELHLDKLDSKWTDQYLDFDYIIISTGKWFLKSAIYYENDTILGCHSCPKRNLTELGFNFAYRKALKFVMNFVVSSNHKGMVFFRTFTADHFENGEWFSGGTCNRTAPIKEGEMERKYLNQMLRDIELDEVGKAASEASKNGVNFKLVDFSALSQLRPDGHPGPYRQFQPFAKEKKAKVQNDCLHWCLPGPIDTWNDIIMEMIVKG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03894 466 Pfam PMR5 N terminal Domain 117 170 IPR025846 -
Vian1g03894 466 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 171 462 IPR026057 GO:0016740
Vian1g03894 466 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 49 459 IPR029962 GO:0016413
Vian1g03894 466 MobiDBLite consensus disorder prediction 55 71 - -
Vian1g03894 466 MobiDBLite consensus disorder prediction 55 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03894 Vian-Chr1 62090095 62092813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03894 - - gmx:100816814 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03894 1 62090095 62092813 Vian1g03894 1 62090095 62092813 ECH