Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03893 ATGGTGAAACATCGCCTTAGAGAGTCTATCAAATCTTTGTTTGGAAGTCATATTGACTCTAATAAAGAAGAGCAGCTCCACGTAGCTAAAGCAGATATTGAAGACAAAGTGAAAGAAATATTGAAACTTATTAAAAATGACAACCTTGAAGAGGATGGTACCCCAGTGCAACTTTCGAAGAGAGAACCACTTATTGAACTGATTGAAGATTTCCACAATCAATACCAATCACTGCATGCGCAATATGATAATCTAACAGGTGAGTTAAGGAAAAGGATCAAGGGCAAGCGAGAAAATGGGAGTTCTTCATCCAGCTCGGACTCAGATTCAGGTTCAGATTATTCTTCAAAGGAAAAAGGCAACAAAAACGGACAACTGGAAAATGAATTTCAAAAGACAATCGGTGGCTTAAAGCAAGAGCTTGAAGTGGTGCATGCAGAAGTGGCTGAATTAAATCGGAAGTTGACAATTTCACATGAAGAGAAGGAGGATCTTAATTCCAAATATCTTGCAGCACTGAGCAAGATACAAGAAGCAGATACAGTTAACATGGATTTGAAAAGTGATGCTGAAGTATTAGGCACTCAAAGATCTAAACTTTTGGCTGAGAATGCTGAACTAAGTAAACAAGTGGATATTGCTGGCAAAAAAGAAGCTGAACTGAGTCAAAGATTGGAAGAGTTGAAGATAGAAAAAGATAGTTTGACCATGGAGAAGGAGACAACTCTCCAACAGATTGAGGAGGAAAAGAAGATTACTGATGGTCTCAGAACCCTTGTTGATCAACTGAAAGATGAGAAATTAGCTCTTGGCAAAGAGTTAGAGGCAGTTACAAGTGAACTTTCCATTCTGAAACCGCAGTTGGAAGACGGAGAACAGAAAATGACAGGTATAAGCCACAATCTGAAAGTTGCTGAGGAAGAAAACAAATCTTTAAAAGAGCAACTTTCACAGGCTTCAAATGAGGTTCAGCTGGCTCAGAGTAGAATACAAGAATTTGTAGCTGAATCAAGTCAGTTAAAAGAGAAACTTGATGTGAGTGGAAGGGAAATTAATGCCTTTACTCAGATGCATGAAGGTTTTCAGAAAGAATCCTCAAATCGTGTGGGGGAACTTGAGGCACAGGTCACCAACCTGGAGTTGGAGTTAGAATCACTTAAAAACCAGAAAAGAGATATAGAAGTACAAATGAAGAGCAGCACCACTGAAGCAAGGGAACTAGGAGAGCAAAATTCAGGCCTACAAAACCAAATATCACAACTCGAATTGAAGTCCAGAGAAAAAGAAGAGGAGCTATCTGCTATGGTGAAGAAACTTGAAGATAATGAGAATGAATCATCTTTGAAAATTTCAGATTTAACATCTCAGATAAACAAGCTGCTAACTGATATTGGGACACTACATACTCAAAAAAATGAACTCGAAGAGCAGATAATTTTTAAAAGTAACGAAGCTTCCACTCAAGTGGAAAACATTACACATGAGGTGAATGCATTGCAGCAAGAAGTGACGTCCCTCCAGCACCAGAAATCTGACTTGGAAGCTCAGTTAGTAGAAAAAGTCCACGAAAATTCCAAGAATATGAATGAAATGCAAACTCTGAAAGAGGAAATTGACCGAAAAATCCTTGAACAAGAGAGACTTCTGGAAGACAGAGAAAATTTAGCCATGCAGCTAAGGACATTGGAATCAGAGATGAACACCATTCAGAACAAAAACAGTGAAGCTGAAGAGCAAATAAGGGCTAAAAGCCATGAGATCAGTCACATGAATCAGGGCATGTTGGAGCTACATGAAAAAATAGCAGAAATAGAGAAGATATCAACAGATAGAGAATCAGATTTGTTGACTCTCCAGGATAAGTTTATTAGCGCAGAGCAAGCAGTTTCAGCTCAGATAATGGCCTCCAGCGAACAAATTAAGAATCTTGAACATGATTTGGCATCACTGCAGAAAGAGAAACACGAATTAGAACAACAGTGTGAAAAGCTGAAGTTGGAGGTAGATTCTATACAGAACCAAAAGGGTGAAGTTGAAGAACAAATGAGAACTAAAGACCATGAGAACTCTGGACTGCGAGAAGAAATTTTGGGATTGCAGGGAACAGTAGCTGTGCTGGAGAAGACATTAGCTGGGAAAGAGGCAGAGCTATCCAGTTTGCAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTGCAGGTCAAATAACTGGCTTCATAGCCCAGATTGATAATTTAAAACATGATGTGGTGTCCCTGCAGAATGAGAAACAGGAAGTAGAACAGCAGTGTGTAAATCTGAAGATGGAGCTGGATTCCGCACAAAACCAGAAAGTTGAAGTTGACGAGCAGTTGAGAACTAAAGACCAAGAGAACACGGAACTGAGAGAGGAAAAAATTGGATTGCAGGGTACAATTACTGCACTGCAGAAAACATTAGCCGATAAAGAGTCAGAACTATCCAATTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCCGGTCAAGTAACTGCCTTCACAGTCCAGATTGAAAATCTGAAACATGATTTGGTGTCCTTGCAGAATGAGAAACAGGAAGTAGAACAGCAGTGTGAAAAGCTGAAGGTGGAGCTGGATTCCTCTCAGAACCAGAAGGGTGAAGTTGAAGAGCAGATAAGAGCTAAAGAACATGTGAACACCGAACTGAAAGAGGAAATTTCGGGATTGCAGGGAACAATTACTGCACTGGATAAAAGATTAGCTGAGAAAGAGTCAGAGTTATCCACTTTACAGCAAAAGCTTGACGAAAAAGAGAGTGAGGCTTCCGGACAAGTAATTGCTTTCACGGCCCAAATTGATGATCTGCAGAAAGGCTTACTTTCATTACAGAAAATAAAAGAAGAATTGGAGCTCCAGCATGAAAAAATTAGTCAAGAACATGCAGAAAGCCTTGTAATGGTAGAGAATGAAAAGAATGACATATCAAGCAGGTCTATGGATCTTAAGAGAACACTAGAAGAGCGAGAAGATTCATATCAGAGGTTAAATGAAGAATATAAACAAATTGATGGTTTGTTTCAGGAATGCATGGTCAAGCTTGAAGTTGCAGAGAAGAAAATTGAAGAAATGGCAGCAGAGTTTCATGAACGAATTGAGTTGAAAGATCAGAAGGAAGCTGATTTGGAACATACAGTAGAAGACCTAAAAAGAGACCTAGAAGAAAAAGGAGATGAAATCAGTACTTTGCTTGAGAGTGTTCGGATCCTTGAGGTTAAGCTTCGTCTGTCAAACCAGAAGCTTCGGGTCACAGAACAATTGTTGAGTGAGAAAGAAGAAAGCTTTAGGAAGACGGAGGAAAAGTTTCAGCAAGATCAGACAGCGCTTGAAGACAGAATTGCTATTTTATCAGCACTAATAACTGCCAACAATGAAGCTTTCGATGGAATTGTTTCTAATGTCAGAGAGTGTGTGAACAGTGTCATGACTGGCATAGAATTTGTAAGCTGTCGAGTTTCTGATGACTGCAAAAGTTACGAGGAGTGTGTCTCCAACATTTCACGCGAGCTTGAGATTGCAAGGGGGCATGTGAGGGATATGAATAAGGAAAAAGAGCAGCTAAAGAGAGACAAAAGCCAGTTGTTGGAGCAACTGCAAGTTAAAAATGAAGAAGAAGTGGCTTTGAGGAAGACAGTTGAGAAGTTAGAGGCAAAGAGTAGAAAGGAAGAATCAGAGAAGATGAATCTGACAACAACTGTAGAACAACTAAAGAAGACAGTTAGAGAGCTGGAGAAAATGATGAAAGAGAAAGAGGACGGTATGTTGGACTTGGGAGAGGAGAAGAGGGAAGTTATCAGGCAGCTGTGTTTGTGGATTGATTATCATCGCAGTCGCTATGACTATCTGAGGGACATTCTATCAAAGACTCGCAGTGGCCAGAGAGCAGCATAA 3930 0.3992 MVKHRLRESIKSLFGSHIDSNKEEQLHVAKADIEDKVKEILKLIKNDNLEEDGTPVQLSKREPLIELIEDFHNQYQSLHAQYDNLTGELRKRIKGKRENGSSSSSSDSDSGSDYSSKEKGNKNGQLENEFQKTIGGLKQELEVVHAEVAELNRKLTISHEEKEDLNSKYLAALSKIQEADTVNMDLKSDAEVLGTQRSKLLAENAELSKQVDIAGKKEAELSQRLEELKIEKDSLTMEKETTLQQIEEEKKITDGLRTLVDQLKDEKLALGKELEAVTSELSILKPQLEDGEQKMTGISHNLKVAEEENKSLKEQLSQASNEVQLAQSRIQEFVAESSQLKEKLDVSGREINAFTQMHEGFQKESSNRVGELEAQVTNLELELESLKNQKRDIEVQMKSSTTEARELGEQNSGLQNQISQLELKSREKEEELSAMVKKLEDNENESSLKISDLTSQINKLLTDIGTLHTQKNELEEQIIFKSNEASTQVENITHEVNALQQEVTSLQHQKSDLEAQLVEKVHENSKNMNEMQTLKEEIDRKILEQERLLEDRENLAMQLRTLESEMNTIQNKNSEAEEQIRAKSHEISHMNQGMLELHEKIAEIEKISTDRESDLLTLQDKFISAEQAVSAQIMASSEQIKNLEHDLASLQKEKHELEQQCEKLKLEVDSIQNQKGEVEEQMRTKDHENSGLREEILGLQGTVAVLEKTLAGKEAELSSLQEKLHEKESEAAGQITGFIAQIDNLKHDVVSLQNEKQEVEQQCVNLKMELDSAQNQKVEVDEQLRTKDQENTELREEKIGLQGTITALQKTLADKESELSNLQEKLHEKESEASGQVTAFTVQIENLKHDLVSLQNEKQEVEQQCEKLKVELDSSQNQKGEVEEQIRAKEHVNTELKEEISGLQGTITALDKRLAEKESELSTLQQKLDEKESEASGQVIAFTAQIDDLQKGLLSLQKIKEELELQHEKISQEHAESLVMVENEKNDISSRSMDLKRTLEEREDSYQRLNEEYKQIDGLFQECMVKLEVAEKKIEEMAAEFHERIELKDQKEADLEHTVEDLKRDLEEKGDEISTLLESVRILEVKLRLSNQKLRVTEQLLSEKEESFRKTEEKFQQDQTALEDRIAILSALITANNEAFDGIVSNVRECVNSVMTGIEFVSCRVSDDCKSYEECVSNISRELEIARGHVRDMNKEKEQLKRDKSQLLEQLQVKNEEEVALRKTVEKLEAKSRKEESEKMNLTTTVEQLKKTVRELEKMMKEKEDGMLDLGEEKREVIRQLCLWIDYHRSRYDYLRDILSKTRSGQRAA 1309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03893 1309 Coils Coil 1045 1079 - -
Vian1g03893 1309 Coils Coil 946 976 - -
Vian1g03893 1309 Coils Coil 482 516 - -
Vian1g03893 1309 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Vian1g03893 1309 Coils Coil 633 681 - -
Vian1g03893 1309 Coils Coil 742 797 - -
Vian1g03893 1309 Coils Coil 703 730 - -
Vian1g03893 1309 PANTHER COP1-INTERACTIVE PROTEIN 1 652 763 - -
Vian1g03893 1309 Coils Coil 68 88 - -
Vian1g03893 1309 Coils Coil 288 343 - -
Vian1g03893 1309 MobiDBLite consensus disorder prediction 94 125 - -
Vian1g03893 1309 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Vian1g03893 1309 Coils Coil 992 1040 - -
Vian1g03893 1309 Coils Coil 1094 1114 - -
Vian1g03893 1309 Coils Coil 211 280 - -
Vian1g03893 1309 Coils Coil 837 934 - -
Vian1g03893 1309 Coils Coil 134 168 - -
Vian1g03893 1309 Coils Coil 1183 1273 - -
Vian1g03893 1309 Coils Coil 528 586 - -
Vian1g03893 1309 Coils Coil 362 477 - -
Vian1g03893 1309 Gene3D - 364 557 - -
Vian1g03893 1309 Gene3D - 754 896 - -
Vian1g03893 1309 Coils Coil 805 832 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03893 - - gmx:100778046 1658.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03893 1 62077359 62081443 Vian1g03893 1 62077359 62081443 ECH