Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03873 ATGTTGAGTACCTCTTCTTATTCTGCCTTTAGCCGCTCCTTTCTTCCGATCAAGGGTTTTCCCCGACCCGTCGCACTACGTCCTTTTCCTCGGATCTTGGAATCCCATGCCAAGTCTCCAAGAAATAGATTGAGTATTCAGTGCTTTAGGCACGATCATCTTTCTCCAGAAACACCCCAACCTGAAGTTATAGAGCACTATTTTCATGAGGAACTGGTGCAATCTGAATTCAGTGACTCCAGTGTTGTCACCAAAAGAGACTGGAAATCATCCCTTCAGAAGGCTGCAAATGAAGTATTCAAGGTAATTGGTTATCCATGGGTTGTGCCATGGACTGCAATAACTATATTACAAGTTATGCTTCTTTGGACGACAGCATTTTGGTTTATAGGATCTTGGATGATTCCTTTTGCTGCCCACATAACTGGCTTTAGCAAGGAGTCTTTAACATTTAGAGGGCAAGCACTGTTCAGTCTCGTTACCGATGTAACTGAAGGACTTGCTGGAGTTGCAATTCTTCTTCACTGTCTTTCTCGATTTCGCCCTCTTCCACCGGACTGGTTCAGGTTTAGCCTGAAAGGCAATTGGCAATTAGATGTCATCATGGGATGTCTCATGTTTCCACTTGTCAATCGGCTGTCACAGTTCAACCTGGACCTACTACCCCTTTTACCCTCTACACCTGTCACCCTTTCTAGTGTTGAACAATCAATAAGGGCAAGGGATCCAGTGGCAATGCTATTGTATGCAACAGTTGTATCAGTCTGTGCTCCTGTATGGGAAGAGATAGTTTTCCGTGGCTTTCTACTCCCATCCCTCACCAAATACATGCCAGTGTGGTGTGCAATACTGGTAAGTTCAATTGCCTTTGCGCTTGCACACTTCAACATACAGAGGATGCTGCCCCTTATATTTCTTGGCATGGTAATGGGTGTGATATATACACGGTCAAGGAATTTACTGCCACCAATGCTGTTGCATAGTCTTTGGAATGGTTTTGTCTTCTTAGATTTGATGAAATAG 1023 0.4399 MLSTSSYSAFSRSFLPIKGFPRPVALRPFPRILESHAKSPRNRLSIQCFRHDHLSPETPQPEVIEHYFHEELVQSEFSDSSVVTKRDWKSSLQKAANEVFKVIGYPWVVPWTAITILQVMLLWTTAFWFIGSWMIPFAAHITGFSKESLTFRGQALFSLVTDVTEGLAGVAILLHCLSRFRPLPPDWFRFSLKGNWQLDVIMGCLMFPLVNRLSQFNLDLLPLLPSTPVTLSSVEQSIRARDPVAMLLYATVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAILVSSIAFALAHFNIQRMLPLIFLGMVMGVIYTRSRNLLPPMLLHSLWNGFVFLDLMK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03873 340 Pfam Type II CAAX prenyl endopeptidase Rce1-like 247 332 IPR003675 GO:0004222|GO:0016020|GO:0071586
Vian1g03873 340 PANTHER CAAX AMINO TERMINAL PROTEASE 67 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03873 Vian-Chr1 61866433 61875619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03873 K07052 - gmx:100816897 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03873 1 61866433 61875619 Vian1g03873 1 61866433 61875619 ECH