Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03869 ATGGCTCAGCAGAGTCCTGATCAGCAGATCAAGCCTTTGGCTCCATTCATATCATCATCCCACTTCAACTTTCAAGAAGATCAAGACTACGCATTCACACACAGCAAAAACATTCGAATAAGAAAGTTTATCCAGTGCTGCGGTTGTGCCACTGCAATTGTTGTGCTACTTGTGATCATAGTACTGGTCTTGGGCTTCACCGTTTACAATGTCAAAGACCCCCAGGTGAGGACGAACGGGATTACCCTTATCAGTGGAACTTTCGCCAACGGTTCTACTGACAACGTTACGATTCTTGCTGATATATCTGTGAAGAATCCAAACGCTTTTACCTTCAGGTTTGGAAACGCCAGAACCGACGTTTACTATAATGGAGAGGAAATAGGTAATGGTGAATCTCCACCGGGGAAAGCCAAGCCCAGAAGAACCATAAGGGTCAACACCACCATGGAGATTATTGCAAAGAAGCTTCTGGCGATTCCAAATTTGGATACTGACCTAAAGGATCAGGCTTTGAATATCAGCAGCTATACCAGGATTGATGGTAAGGTCAAAATACTAAACATTTTTTCGAGGAAAGTTGTGGTTGAGATGAACTGCACAATCACATACAACATCACCACTGGGTCAATTAAAAATGGTGACAATTGTCTTGGAAACGTTGATATTTAG 672 0.4271 MAQQSPDQQIKPLAPFISSSHFNFQEDQDYAFTHSKNIRIRKFIQCCGCATAIVVLLVIIVLVLGFTVYNVKDPQVRTNGITLISGTFANGSTDNVTILADISVKNPNAFTFRFGNARTDVYYNGEEIGNGESPPGKAKPRRTIRVNTTMEIIAKKLLAIPNLDTDLKDQALNISSYTRIDGKVKILNIFSRKVVVEMNCTITYNITTGSIKNGDNCLGNVDI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03869 223 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 39 207 - -
Vian1g03869 223 Pfam Late embryogenesis abundant protein 102 201 IPR004864 -
Vian1g03869 223 Gene3D - 61 206 - -
Vian1g03869 223 SUPERFAMILY LEA14-like 55 151 - -
Vian1g03869 223 SMART why 81 203 IPR013990 GO:0009269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03869 - - gmx:100781009 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03869 1 61829076 61829747 Vian1g03869 1 61829076 61829747 ECH