Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03864 ATGAAGTGCAGATCGGTGGCGTGCATATGGTCCGGCACGCCGTTTCCTCACCGCGTCACCGCCGTCGCCGCTTTGACGGAACCACCGACGCCAACCTTTTACACAGCCGGATCGGATGGCTCCATCATCTGGTGGACCATCTCCAGTTCCGCTTCCACACCGGAAGTTAAGGCGGTGGGCGTGCTGTGCGGTCACGGCGCACCGGTTACCGATCTCGCCGTATGTAGGCCAATTGCAGATGCAGGAAACGGTTATACTTCGAGTGCAAGTAAGTTCAGTGCGTTGATAAGTGCGTGCTGTGATGGTTTTCTGTGTGTGTGGAGCAAGAACAGTGGCCATTGCCGGTGCCGGAGGAAATTGCCGCCTTGGGTTGGCACTCCTCGTTTAATTAGAACCTTGCCTTCGACACCGAGATATGTGTGTATAGCGTGTTCTTTAGAGGGGAATGAAGGATTAATTGATAGAGAAACTCAGCCTAGGAAGCCTCCTAAATGCACTGTTCTTATTGTGGACTCCTATTCGCTTTCCATTACTCAAACTGTGTTTCATGGAAGTCTATCCATTGGTCCAATTAAGTTTATGGCACTGGTGTTGGGTGATGACGAGAAGAGAAACTCTGTGTTTGTGGCTGATTCGGCTGGGAGGCAGCAGATGGTTCCGATATCAGAGGATCGAGGGGAGAGCTTGGCGGGTTCACTTGGTGATAAAGGTCAATTGGAGACCTCTTTTTTCGACGAGGAATTGAGTAGTGTGGAGCAGATTGTTTCGGTTTTAACCTATGGGAATGTTGTTGCTTCAATATTGGAAGATCGGTGTGTCTTCAGGTTACTGAATCATAGTGTGATTGGAGAAGTTTCTTTTGTGGATAGCTTATTCAGTTTGGATCACGGTTCTATTCAAACACATGCTGTTGGTGGCATTTTTCTTGAGAATGATGATGTGGAGAATGTGTGCAACGGCAACGAATATGGAAACTCGATTACAGTACGATTTGTTGTGTGGAATAATGTAGGTTATGCAGTTATATATAATGTATTGTATCAGAATGATGTTTTCCAATGTGAACCTCTTTCTGAGATTCCTGGTACTCGTTATCAACCTGATATGAGATTATCTGTTTTTTTTCAACAAGTAAGTCAATATCTTGTATGCATCAAGTCAATTTGCTATAATTACGAGGACCCTTTACTATGGAGACCACTTGCCACAATGTGGTCATTGCATGATTTTAGTGATGAACCTGGTAGATTGTATCGTCAATGCAGAATGGTCGGTGATGATGTATCTTTCACTGGCTGGTTTGAGAAATCGACTCAGCTCAAGGGACTCGATGTACTTGAGACTACTTCTACTTTTGGTGTGAGTCCAAGTTCTGATATTGTAGACAACAAACAAGCTGGTACTGGAACTAATTGTTATGCTTACAAAGGGAAGGTCGTTTCTTCCTCCATGATCATCTCCGAGAACCTCTTTACTCCTTATGCTGTTGTATACGGTTTTTTAAGTGGAGAAATAGAGGTTGTAAGGTTTGGTTTGTTTCAAGGGATTTGCTTGGATGATACAAGTTCCAATCCTGATGAAAAGCCAACTGCTTGCAAACAGTTTTTCTCAGGACATACAGGTGCTGTACTTTGTTTGGCAGCACATCAAATGATGGGTAGTGCCAAAAGCTGGAATTTTAAGCAGGTTTTGGTGTCTGGAAGTATGGATTGCACGATTCGAATATGGGATCTTGACACTGGCAGTCTTATCATGGTAATGCATCATCATGTGGCTCCTGTCCGTCAAATTATTCTTGCTCCATCTTTGACTGTGCATCCTTGGAGTAATTGTTTCCTTTCAGTAGGAGAGGATGCATGTGTTGCTCTTATTTCTCTAGAGACTCTGCGAGTGGAGAGAATCTTTCCTGGACATATGAACTATCCTTCTAAAGTTTTATGGGATGGAGCAAGAGGTTATATTTCCTGTCTCTGTCAAACACATTACGGAACTTCTGATGCTACTGATGTATTATACATTTGGGATGTAAAGACAGGTTCACGTGAGCGAGTCCTACTTGGGACAGCTGCACATTCAATGTTTGATAATTTTTGTAAAAGCATCAGCAAGAATTCCGTATCTGGCACATTGCTGAATGGAAACACATCAGTCTCTTCCTTACTCCTTCCGATAGTTGATGATGCAAGGTTCTCTAACTCCCCCTTAAATCGTTCAGACAACTTGCTTACTTCATCAAGGTCGTCACCAAATATTTCAAATATGACTGAGCTGAATTCTTCCAAAACAAATGCAGGTAAAGAAATTTCAGTGAAGCCACATTCATCCTCTCAAATTGGTCTTTTGAGTAGCAAGCTTCCTATCAAATGCGCTTGCCCTTTCCCAGGGATAGTGTCTCTGTGTTTTGATCTTGCATCCTTGATGTTCTTATTTCAAAAGAATGAGTCCATTGAAAATGGTGGTGGCAAGCCAGTCAATATCAATTTGAAGCAGCAGGGAGTCCAGGAGCAAAATCCCAGCTACCATAATGCAGAAACTTTAGAGGGGCATGACTTGGTTAACCTATTTGAAGAATACTTACTTCGATATAGCTTGTCATATCTACATTCTTGGAGTGTAGACATAGAGCTTGATAATTTGTTGATAAGTGACATGAAGCTGATGAGACCAGAAAACTTCATCGTAGCTTCTGGTCTGCAGGGGGATAAAGGATCATTGACATTGACATTTCCTACTCAGAGTGCTAATCTTGAGCTCTGGAAATCATCATCCGAGTTTTGTGCAATGAGATCGTTGACAATGGTGTCCCTTGCCCAACGTTTGATTAGCTTGTCTCACTCTGGTTCGGCAGCCAGCAGTGCTTTAGCAGCCTTTTATACTCGGAATTTCTTGGAAAATTTTCCAGATGTGAAGCCACCTTCATTACAGCTCTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTGCGTATGGCTGCACGCTCTATATTTCACTGTGCTGCCTCTCATGTTATTCCTCTACCTCTATGCAATTTGAAACCTACTGAGTCAAACGATATGAGTTTCCATACTGGAAGTCGAGACAGGCATAACCTAGGAAACAAGCGGGAAGAGAGTATATCTCCTAAGGTAGAAAAACAAGGAGTTTCCCAAGATGAGGAATCCAAGATACTTGCTTGGCTAGAATCATTTGAAGTGCAAGATTGGATTTCTTGTGTTGGTGGAACTAGTCAGGATGCAATGACATCTCACATTATTGTTGCTGGTGCACTGGCTATCTGGTATCCTAGTCTTGTAAAGCCAAGTCTTTCCAGGCTTGTTGTTCATCCATTAATGAAGTTGGCTATGGCTATGAACGAGAAGTATAGCTCCACTGCTGCTGAGCTCCTTGCAGAGGGCATGGAAAGTACATGGAAAGAATGCATTGTCTCTGAGATTCCTCGTCTGATTGGGGATATTTTTTTCCAAGTAGAGTTGAGTGGCCCATCTTCCAAGTCAGTGAAAGAAATATCGGATGCATCTTTTTCTATTAAAAAGACATTGGTGGAGGTTCTTCTTCCAAGTTTGGCTATGGCTGATATAACAGGCTTTTTGGCTGTGATTGAAAGCCAAATTTGGTCTACTGCATCTGATTCACCTGTCCACATGGTGTCCTTGTTGACTCTCATAAGGATCATGCGTGGTTCTCCAAAGAATTTGGCTCAATACCTTGACAAGGTGGTCAACTTCATTTTACAGACTATAGATCCTAGCAACTCAGTCATGCGGAAGGCATGCTTCCAAAGTTCAATGACAACTTTCAAGGAACTTGTACGTGTATATCCCATGGTGGCTGTCAATGATTCATGGACCAAACTAGCAGTTGGAGATGTGATTAGAGAAGTTAACAACGCAAACATCAGGGTTTATGATATGCAAAGTGTGACAATGATAAAGGTTTTAGATGCAAGTGGGCCTCCTGGACTTCCAACTCTACTCCCAGCATCATTATCAGGAACAATGTTGACCACTGCTATTTCAGCACTGAGCTTTTCACCAGATGGAGAGGGGCTGGTGGCTTTTTCCGAACATGGACTACTGATTAGATGGTGGTCACTGGGATCTTTCTGGTGGGAGAAACTCAGCCGGAACTTTGTTCCTGTCCAGTGCACCAAACTAATATTTGTTCCTCCTTGGGAAGGATTTTCTCCTAATTCTTCAAGAACAAGCATAATGGCCAATATTTTGGAAACTGACAGGCTGCAGAACTTTCAGGATAATGCGAGGGATTCAAATCACGGGGACAGTCCAAAACAATTGCTTCATAATTTGGATCTCTCCTATAGACTAGAATGGGTTGAGGGGCGGAAAGTACTTCTTACAAGACACGGTCATGAATTGGGCACTTTTCAGTTATAA 4395 0.43 MKCRSVACIWSGTPFPHRVTAVAALTEPPTPTFYTAGSDGSIIWWTISSSASTPEVKAVGVLCGHGAPVTDLAVCRPIADAGNGYTSSASKFSALISACCDGFLCVWSKNSGHCRCRRKLPPWVGTPRLIRTLPSTPRYVCIACSLEGNEGLIDRETQPRKPPKCTVLIVDSYSLSITQTVFHGSLSIGPIKFMALVLGDDEKRNSVFVADSAGRQQMVPISEDRGESLAGSLGDKGQLETSFFDEELSSVEQIVSVLTYGNVVASILEDRCVFRLLNHSVIGEVSFVDSLFSLDHGSIQTHAVGGIFLENDDVENVCNGNEYGNSITVRFVVWNNVGYAVIYNVLYQNDVFQCEPLSEIPGTRYQPDMRLSVFFQQVSQYLVCIKSICYNYEDPLLWRPLATMWSLHDFSDEPGRLYRQCRMVGDDVSFTGWFEKSTQLKGLDVLETTSTFGVSPSSDIVDNKQAGTGTNCYAYKGKVVSSSMIISENLFTPYAVVYGFLSGEIEVVRFGLFQGICLDDTSSNPDEKPTACKQFFSGHTGAVLCLAAHQMMGSAKSWNFKQVLVSGSMDCTIRIWDLDTGSLIMVMHHHVAPVRQIILAPSLTVHPWSNCFLSVGEDACVALISLETLRVERIFPGHMNYPSKVLWDGARGYISCLCQTHYGTSDATDVLYIWDVKTGSRERVLLGTAAHSMFDNFCKSISKNSVSGTLLNGNTSVSSLLLPIVDDARFSNSPLNRSDNLLTSSRSSPNISNMTELNSSKTNAGKEISVKPHSSSQIGLLSSKLPIKCACPFPGIVSLCFDLASLMFLFQKNESIENGGGKPVNINLKQQGVQEQNPSYHNAETLEGHDLVNLFEEYLLRYSLSYLHSWSVDIELDNLLISDMKLMRPENFIVASGLQGDKGSLTLTFPTQSANLELWKSSSEFCAMRSLTMVSLAQRLISLSHSGSAASSALAAFYTRNFLENFPDVKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHVIPLPLCNLKPTESNDMSFHTGSRDRHNLGNKREESISPKVEKQGVSQDEESKILAWLESFEVQDWISCVGGTSQDAMTSHIIVAGALAIWYPSLVKPSLSRLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKECIVSEIPRLIGDIFFQVELSGPSSKSVKEISDASFSIKKTLVEVLLPSLAMADITGFLAVIESQIWSTASDSPVHMVSLLTLIRIMRGSPKNLAQYLDKVVNFILQTIDPSNSVMRKACFQSSMTTFKELVRVYPMVAVNDSWTKLAVGDVIREVNNANIRVYDMQSVTMIKVLDASGPPGLPTLLPASLSGTMLTTAISALSFSPDGEGLVAFSEHGLLIRWWSLGSFWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRTSIMANILETDRLQNFQDNARDSNHGDSPKQLLHNLDLSYRLEWVEGRKVLLTRHGHELGTFQL 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03864 1464 Gene3D - 514 779 IPR015943 GO:0005515
Vian1g03864 1464 MobiDBLite consensus disorder prediction 1019 1046 - -
Vian1g03864 1464 SUPERFAMILY ARM repeat 934 1276 IPR016024 -
Vian1g03864 1464 SMART WD40_4 55 108 IPR001680 GO:0005515
Vian1g03864 1464 SMART WD40_4 580 625 IPR001680 GO:0005515
Vian1g03864 1464 SMART WD40_4 628 675 IPR001680 GO:0005515
Vian1g03864 1464 SMART WD40_4 5 46 IPR001680 GO:0005515
Vian1g03864 1464 SMART WD40_4 529 577 IPR001680 GO:0005515
Vian1g03864 1464 SMART WD40_4 1322 1364 IPR001680 GO:0005515
Vian1g03864 1464 ProSitePatterns Trp-Asp (WD) repeats signature. 564 578 IPR019775 -
Vian1g03864 1464 SUPERFAMILY WD40 repeat-like 1276 1368 IPR036322 GO:0005515
Vian1g03864 1464 SUPERFAMILY WD40 repeat-like 15 686 IPR036322 GO:0005515
Vian1g03864 1464 Pfam WD domain, G-beta repeat 532 577 IPR001680 GO:0005515
Vian1g03864 1464 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 527 588 - -
Vian1g03864 1464 ProSiteProfiles Trp-Asp (WD) repeats profile. 564 586 IPR001680 GO:0005515
Vian1g03864 1464 Gene3D - 4 241 IPR015943 GO:0005515
Vian1g03864 1464 PANTHER RABCONNECTIN-3B, ISOFORM A 3 1464 - -
Vian1g03864 1464 MobiDBLite consensus disorder prediction 741 768 - -
Vian1g03864 1464 MobiDBLite consensus disorder prediction 1021 1046 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03864 K24738 - gmx:100818675 2563.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03864 1 61744904 61765020 Vian1g03864 1 61744904 61765020 ECH