Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03859 ATGGAGAAAACAAACAAACTTGACCATCTCCCATCGCACACACTTATAAATTTGAACAGACATCATGCCCCTTCGACCTCTACTAGAGCCACCTTAAGTACACAACCTCTATTACTCACAATGGCCGCGATATCAAACTCACTATCACTCAAGCACGGTTTCTCTCTGGCGCGTCCGCAACGTCCTTTTCTCACTCGAGCTCCTCCTTCTTCCACTTCAATCAAATTCAGAAGATGCTACGCCGCGTTCGCCAATGAGAATCGCGAGTACGTGATCGTTGGCGGTGGAAATTCCGCGGGATATGCTGCACGCACTTTCGTCGAGCACGGCATGGCGGATGGACGCCTCTGTATTGTGACCAAAGAGCCATATGCACCTTACGAGCGTCCCGCTCTGACGAAAGCGTATTTGTTCCCGCCGGATAAGAAACCAGCGCGTCTTCCTGGTTTTCATACGTGTGTTGGATCCGGTGGAGAGAGGCAGACTCCAGAGTGGTATAAAGAGAACGGGATAGAGATGTTGTATGAAGATCCAGTAAAGGATATTCATATTGAAAATCAAACTTTGACAACAAATTCTGGAAAACTTCTGAAGTATGGTTCGCTTATTATTGCAACAGGATGTACAGCATCAAGGTTTCCAGAGAAAAATGGGGGAAACCTACCTGGTGTTCACTATATCCGGAATGTTGCAGATGCTGATGCACTGATTTTATCATTGGAAAAATCAAAAAAGGTTGTAGTTGTTGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCTGCTGTTGGTTGGAATCTGGATACCACGATCATATTTCCGGAAGATCAACTTTTGCAAAGACTGTTTACTCCTTCTCTTTCCCGGAGATATGAAGAACTCTACCAAAAAAATGGAGTCAAAGTCTTAAAGGGTGCCTCCATAAAAAAATTGGAAGCTGGTTCTAATGGACATGTAGCTGGTGTGAAACTCGGAGATGGATCTATGGTGGAAGCAGATACAGTTATCATAGGCATCGGAGCTAAACCTGCTGTGAGCCCCTTTGAGAGGGTGGGCCTAAATACAGATGTTGCTGGTATACAGGTTGATGGTTTGTTCCGGACAAGCATTCCTGGAATCTTTGCTGTTGGTGATGTAGCAGCTTTCCCTTTAAAGATTTATGACCGTATCTCTCGAGTGGAACATGTAGATCATGCCCGTCGCTCTGCACAGCACTGTGTGAAAGCATTACTCAGCGCACAAACTCAAACGTATGACTATCTTCCATACTTCTACTCGAGGATTTTTGAATATGAAGGAAGCCCTAGAAAAGTATGGTGGCAGTTCTTTGGAGACAATGTCGGAGAAACAGTTGAAGTTGGAAATTTTGATCCTAAAATAGCTACCTTCTGGATTGGATCTGGTAAGCTGAAAGGAGTTCTTCTTGAAAGTGGGAGCCCCGAGGAATTTCAACTCCTGCCTAAACTCGCCAGAAATCAACCTCTGATTGACATAGCTAAACTTCAAAACGCAACTACAGTGGAGGAGGCTCTAGAGATTGCTCGGGCATCCTTGCAAGCCGCTGCCTAA 1569 0.4519 MEKTNKLDHLPSHTLINLNRHHAPSTSTRATLSTQPLLLTMAAISNSLSLKHGFSLARPQRPFLTRAPPSSTSIKFRRCYAAFANENREYVIVGGGNSAGYAARTFVEHGMADGRLCIVTKEPYAPYERPALTKAYLFPPDKKPARLPGFHTCVGSGGERQTPEWYKENGIEMLYEDPVKDIHIENQTLTTNSGKLLKYGSLIIATGCTASRFPEKNGGNLPGVHYIRNVADADALILSLEKSKKVVVVGGGYIGMEVAAAAVGWNLDTTIIFPEDQLLQRLFTPSLSRRYEELYQKNGVKVLKGASIKKLEAGSNGHVAGVKLGDGSMVEADTVIIGIGAKPAVSPFERVGLNTDVAGIQVDGLFRTSIPGIFAVGDVAAFPLKIYDRISRVEHVDHARRSAQHCVKALLSAQTQTYDYLPYFYSRIFEYEGSPRKVWWQFFGDNVGETVEVGNFDPKIATFWIGSGKLKGVLLESGSPEEFQLLPKLARNQPLIDIAKLQNATTVEEALEIARASLQAAA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03859 522 Gene3D - 423 509 IPR016156 GO:0016491|GO:0050660
Vian1g03859 522 PRINTS Pyridine nucleotide disulphide reductase class-I signature 245 270 - -
Vian1g03859 522 PRINTS Pyridine nucleotide disulphide reductase class-I signature 373 380 - -
Vian1g03859 522 PRINTS Pyridine nucleotide disulphide reductase class-I signature 333 347 - -
Vian1g03859 522 PRINTS Pyridine nucleotide disulphide reductase class-I signature 89 111 - -
Vian1g03859 522 Pfam Pyridine nucleotide-disulphide oxidoreductase 90 403 IPR023753 GO:0016491
Vian1g03859 522 Gene3D - 91 406 IPR036188 -
Vian1g03859 522 Gene3D - 213 340 IPR036188 -
Vian1g03859 522 PANTHER APOPTOSIS-INDUCING FACTOR 1 88 505 - -
Vian1g03859 522 PRINTS FAD-dependent pyridine nucleotide reductase signature 332 348 - -
Vian1g03859 522 PRINTS FAD-dependent pyridine nucleotide reductase signature 358 380 - -
Vian1g03859 522 PRINTS FAD-dependent pyridine nucleotide reductase signature 91 110 - -
Vian1g03859 522 PRINTS FAD-dependent pyridine nucleotide reductase signature 199 217 - -
Vian1g03859 522 PRINTS FAD-dependent pyridine nucleotide reductase signature 245 263 - -
Vian1g03859 522 SUPERFAMILY FAD/NAD(P)-binding domain 89 431 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03859 Vian-Chr1 61693820 61701751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03859 196 384 Acyl Lipid Metabolism Gene Families AT1G48030 29.126 6.90e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03859 K08232 - gmx:100819919 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03859 1 61693820 61701751 Vian1g03859 1 61693820 61701751 ECH