Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03858 ATGGATGGAACCCACGACCAAGAAATGGAAGACCTCGAACTTTTTCAGAAGCACGTCGGAGACCGCTTCTCCGAACTCTTCTCCACCACCACCGAGGACTCCTCCGGCGACGCCCTCCTCTCCATCTCCTGGCTCCGCCGCCTCCTCGACGAGCTCCTCTGCATCGAGGCAGAGTTCAAAGCCGTCCTGCTCATGGGCCGCGACCCCTCCCAGATCGCCAAGCCGCCGCTCGACAAGCTCCTCCCAGAGCTCCTCGACCGCTTCGTCAAATCCCTCGACGTCTGCAACGCCGTCGTGCTCGGCCTCGACGCCGTCAAGAACCTCCAGCGCCTCGCCGAGATCGTCGTTGACGCGCTCGAAGTGACGCCGCTGGGCGACGGCCAGGTCCGCCGCGCGAAGAAGGCGCTCTCCGCCCTCATCGCCGCCATGCTGCACGAGGACAACGCCTACGCGAAGGGGACCGAGCGCAACCGGTCCTTCGGGCGGCGCTCCGGGAACTCCGGCTCGAACAGCAAGGACAGGGTGCGGGCGCTGTCGTGGACGATGGCGCGGAACTGGTCGGCGTCGAAGCAGATCCACGCGATGATGTCGAATCTGGCGGCGCCTCGCGGCGCAGAGTCGTCGGGATTGGCGCAGCCTGTTTACATAATGAGCACCGTGCTGGTGTTCGTGATGTGGGCTTTTGTGGCAGCGGTTCCATGCCAGGAGAGGAATGGGTTGGGGACGCACTTTCCCTTACCGAGGCAATTGAACTGGGCCCAGCCCTTGATCGGATTGCAGGAGAAGATCGCGGAGGAGTGGAAGAAGAAGGAGAAGAAGGGTAACGTGGGATTGTTGGAGGAGATGCATAGGATGGAGAAGTTGGGACAATCGCTGATCGAGTTCGCTGACTCCTTTCAGTTTCCCCCCGAAACGGAGCGTTTGGATGAAATGAAGAGGAACGTTGAGGACTTGGCCGAAATTTGTAAGAAAATGGACCAAGGCTTGGAACCCATGCAGCAGCAGATTAGGGAAGTCTTTCACAGGATCGTCAGGAGCAGGGCCGAGTTTCTCGTTGTCTTGGACCAAGCTGGGAAGTTGTCTGCACCCGCTGTTTAA 1098 0.6029 MDGTHDQEMEDLELFQKHVGDRFSELFSTTTEDSSGDALLSISWLRRLLDELLCIEAEFKAVLLMGRDPSQIAKPPLDKLLPELLDRFVKSLDVCNAVVLGLDAVKNLQRLAEIVVDALEVTPLGDGQVRRAKKALSALIAAMLHEDNAYAKGTERNRSFGRRSGNSGSNSKDRVRALSWTMARNWSASKQIHAMMSNLAAPRGAESSGLAQPVYIMSTVLVFVMWAFVAAVPCQERNGLGTHFPLPRQLNWAQPLIGLQEKIAEEWKKKEKKGNVGLLEEMHRMEKLGQSLIEFADSFQFPPETERLDEMKRNVEDLAEICKKMDQGLEPMQQQIREVFHRIVRSRAEFLVVLDQAGKLSAPAV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03858 365 Coils Coil 308 328 - -
Vian1g03858 365 MobiDBLite consensus disorder prediction 154 174 - -
Vian1g03858 365 MobiDBLite consensus disorder prediction 160 174 - -
Vian1g03858 365 PANTHER BPS1-LIKE PROTEIN 10 353 - -
Vian1g03858 365 Pfam Protein ROH1-like 1 353 IPR008511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03858 Vian-Chr1 61674006 61675103 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03858 - - gmx:100817717 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03858 1 61674006 61675103 Vian1g03858 1 61674006 61675103 ECH