Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03841 ATGGCACGGTTGGTTCTGCCATCGAAGAGATTGTCTCTTTCGAGGAACACTCTACTGGGTTTGATCTCCCCTGCTCCTCTTCAGCTTAATTGCGGTGTTGGTTATTTTCAGAATACAGCAAAAAGGAGCATCCGTTACAAGCATTGCGTTGCTTCGGAGGTTAATTTCCAAAAGAAGTATTCCCCATTATATACTTCATTACCAAGGGTCAAGCAAGTAAGTAAGAGGCTAATTTGTGCTGTTGCCACAGAGGATTTACCAAAGCAAGTTGAAGAATCTAATATGGAGACACCAAAGGAAATATTCTTAAAGGATTATAAGAGGCCTGATTACTACTTTGACAATGTGGATCTAGAATTTTCCTTGGGAGAGGAGAAGACAATAGTTAGTTCTAAAATATCTGTGTATCCTCGCATTGAAGGTTCTTCCCCCCCTCTAGTTTTAGATGGACAAGATGTATCTTTAGTTTCAGTTCAGCTGAATGGAAAGGCTTTGAAGGAGGAAGATTATCATTTGGATGCACGGCATCTCACAATCCTATCACCTCCTAGTGGTAAATATGATCTTGAAATTGTCACTGAGATCTGTCCACAGAAAAATACATCATTAGAGGGACTTTACAAATCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGTTTCCGTAAAATTACATTTTATCAGGATCGACCTGACATAATGGCAAAATATACCGTTCGAATTGAGGCTGATAAATCGCTGTATCCAGTGTTGTTGTCTAATGGAAACCTGGTTGAGCATGGTGACCTAGAGGGCGGGAGGCATTACACTGTTTGGGTGGACCCCTTCAAGAAACCTTGTTACCTGTTTGCCTTGGTTGCCGGACAATTAGAGAGCAGAGATGACATATTTACTACCCGTTCAGGGCGGAATGTGGTCCTTAGGATATGGACACCTAAAGAAGATGTCCCTAAGACTGCACATGCTATGTATGCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCAATGGAGAACAAGAGCTTGAATATTTTCAATTCAAAGCTTGTATTGGCCTCTCCAGAGACTGCTACTGATGCAGATTATGCTGCAATATTGGGGGTTATTGGACATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACTTGTCGAGACTGGTTCCAGCTTAGCCTGAAAGAAGGTCTCACTGTTTTTCGGGATCAGGCAAGCCTCCATTCCCCAGAATTTTCATCTGATATGGGAAGTCGAACTGTAAAGCGAATTGCTGATGTTTCTAATCTTAGAAATTACCAGTTTCCACAGGATGCCGGTCCCATGGCCCATCCAGTGCGACCACATTCTTATATCAAGGTCTATGAAAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTATTAGGAAGTCAAGGGTTCCGAAAAGGCATGGATCTTTATTTCAAGAGACATGATGGTCATGCTGTAACATGTGAAGATTTTTTCTCTGCCATGCGGGATGCAAATGATGCTGATTTTGCAAATTTCTCGTTATGGTATTCTCAAGCTGGGACCCCTGTTGTCAAAGTAAGCACTTCTTATAATTCAGAAGCACATACTTTTTCTTTGAAGATTAGCCAAGAGATACCACCTACTCCAGGACAAGCGGTTAAGGAACCCATGTTCATTCCTGTTGCAGTGGGTTTGCTTGATTCCACCGGCAAGGACATTCCTCTTTCAAATCTTTATCACAACGGGACTCTGCAATCTGTTTCAAACAATGTTCAACCAGTCTGCACTACAGTCCTTAGAGTCACCAAGAAAGAGGAAGAATTTATATTCACTGATATATTTGAGAAGCCTGTTCCTTCTTTGTTAAGGGGATACAGTGCTCCTGTTCGTCTGGAATCTGATCTCACTGAGAGCGACCTGTTTTTCCTGCTAGCTAATGATTCTGATGAATTCAACCGTTGGGAGGCTGGACAAGTTTTGGCACGGAAGTTGATGCTTAACTTGGTGGATGATTTTCAACATAACAAACCATTGGTTTTGAATCCCAACTTTGTTGTTGGGTTCAAACGTATTCTATGTGACTCAAGTCTGGACAAAGAATTTGTGGCAAAGGCAATAACTCTGCCCGGGGTAGGAGAAATAATGGACATGATGGAGGTTGCAGATCCAGATGCTGTTCATGCTGTTCGTACTTTCATCAGGAAACAGCTAGCCAGTGAACTGAGATCAGAGTTCCACACAACAGTATTATATAATAGGAGCTCAGAAGATTATGTCTTTGATCACCCAAACTTGGCCAGGCGTGCTCTGAAGAATATTGCTCTTGCTTATCTTGGATGCCTCGAGGAACAAGAATTCACCGAGCTTGCAATTCAAGAGTACAAAACTGCCACTAACATGACTGAACAATTCGCCGCTTTGGTTGCCATAGCCCAGACACCCGGTAAAACCCGTGATGATTTTCTAGCTGATTTTTACGGAAAGTGGAAGCATGATTTCTTGGTGGTGAACAAATGGTTTGCTCTGCAATCATCGTCTGATATTCCTGGTAATGTCGAGAATGTGCGGAAACTGCTAGACCACCCAGCATTTGACCTGCGCAATCCCAACAAAGTGTACTCTCTCATTGGAGGTTTCTGTGGGTCTCCGGTGAACTTTCACGCGAAGGATGGATCAGGCTACAAGTTTTTGGGAGAAATTGTGCTGCTACTAGACAAGCTAAATCCTCAGGTTGCCTCAAGAATGGTGTCAGCCTTCTCAAGATGGAAGCGTTATGACGAAAGCAGACAAAGTCTTGCGAAGGCTCAATTGGAGAAGATCGTGTCTAGTAATGGACTGTCGGAGAATGTGTATGAGATAGCCTCGAAAAGCTTAGCTGTTTGA 2940 0.4279 MARLVLPSKRLSLSRNTLLGLISPAPLQLNCGVGYFQNTAKRSIRYKHCVASEVNFQKKYSPLYTSLPRVKQVSKRLICAVATEDLPKQVEESNMETPKEIFLKDYKRPDYYFDNVDLEFSLGEEKTIVSSKISVYPRIEGSSPPLVLDGQDVSLVSVQLNGKALKEEDYHLDARHLTILSPPSGKYDLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLVEHGDLEGGRHYTVWVDPFKKPCYLFALVAGQLESRDDIFTTRSGRNVVLRIWTPKEDVPKTAHAMYALKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQASLHSPEFSSDMGSRTVKRIADVSNLRNYQFPQDAGPMAHPVRPHSYIKVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGHAVTCEDFFSAMRDANDADFANFSLWYSQAGTPVVKVSTSYNSEAHTFSLKISQEIPPTPGQAVKEPMFIPVAVGLLDSTGKDIPLSNLYHNGTLQSVSNNVQPVCTTVLRVTKKEEEFIFTDIFEKPVPSLLRGYSAPVRLESDLTESDLFFLLANDSDEFNRWEAGQVLARKLMLNLVDDFQHNKPLVLNPNFVVGFKRILCDSSLDKEFVAKAITLPGVGEIMDMMEVADPDAVHAVRTFIRKQLASELRSEFHTTVLYNRSSEDYVFDHPNLARRALKNIALAYLGCLEEQEFTELAIQEYKTATNMTEQFAALVAIAQTPGKTRDDFLADFYGKWKHDFLVVNKWFALQSSSDIPGNVENVRKLLDHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLLLDKLNPQVASRMVSAFSRWKRYDESRQSLAKAQLEKIVSSNGLSENVYEIASKSLAV 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03841 979 CDD M1_APN 105 536 - -
Vian1g03841 979 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Vian1g03841 979 FunFam Aminopeptidase N 108 291 - -
Vian1g03841 979 Gene3D - 539 652 IPR038438 -
Vian1g03841 979 Pfam Domain of unknown function (DUF3458) Ig-like fold 539 652 IPR035414 -
Vian1g03841 979 Gene3D Neutral Protease Domain 2 377 538 IPR027268 -
Vian1g03841 979 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 98 289 IPR042097 -
Vian1g03841 979 Pfam Peptidase M1 N-terminal domain 118 283 IPR045357 -
Vian1g03841 979 Gene3D - 293 376 - -
Vian1g03841 979 Gene3D - 654 978 IPR037144 -
Vian1g03841 979 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 93 978 IPR012779 GO:0008270
Vian1g03841 979 Pfam Peptidase family M1 domain 325 531 IPR014782 GO:0008237|GO:0008270
Vian1g03841 979 Pfam Domain of unknown function (DUF3458_C) ARM repeats 657 978 IPR024601 -
Vian1g03841 979 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
Vian1g03841 979 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Vian1g03841 979 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Vian1g03841 979 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Vian1g03841 979 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 545 - -
Vian1g03841 979 FunFam Putative aminopeptidase N 293 376 - -
Vian1g03841 979 FunFam Aminopeptidase N 539 653 - -
Vian1g03841 979 NCBIfam aminopeptidase N 105 977 IPR012779 GO:0008270
Vian1g03841 979 FunFam Puromycin-sensitive aminopeptidase 654 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03841 Vian-Chr1 61456352 61465371 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03841 K01256 - gmx:100775476 1745.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03841 1 61456352 61465371 Vian1g03841 1 61456352 61465371 ECH