Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03839 ATGCCACCTTTTGCAGGTTCTGAACCAGCTGGCTTCCCCAAGCCCGATTCCAACATAGTTTCCATCGACGTCGGAGGCCAACTCTTCCAAACCACCAAACAGACACTAACCTCGGCTGGTCCCAAAACCTTCTTCTCCAGAATTGCGGAGTCTTCAGGAATCTACGCGCCCTTCATAGACAGAGACCCGGAAATCTTTTCGCTCCTTCTCTCTCTCCTCCGCACCGGAAACCTTCCCTCAAAGGCCAAAGCTTTCGATCTCCAAGACCTAATTATTGAGTCCAAATTCTACGGCATCGAAAGCCTCCTCATCAATTCCCTCTCTAACCCTTCTCAATTGGAACCCTTCAACCTCCAAAAATCCCTCCTATTGCCCCTCAACGGCCGCGACTCCCCCTCCGCCCTCGCCGCCGACGCAGCCTGCGGTGCCCTCCACGTCGCGCACGGCAGCAAGATCACCTCCTTCGACTGGTCCCTCCGCCGCAAGGCCACCGTCCTCACCCACTTCACAGCCGTCGACTCCCTCCTGGCGCTCTCACCAACACTGGTTGCCGCCGGCGCCAACGACTTCTCCGGCCTCCAGATCCTGGACCTCGAGAACGGCCGCGTCAAGGAAACCCTAAACTGGGAAAACGTCACCAAATCCGGGTCCACCGTCCAAGCCATCGGATCCTCCTCGGAAAACATGTTCGTCAGCTTCGAATCCTCGCGCCGAAACTCCAATTCCATAATGGTTTACGATTTGCATTCTCTAACCCCCGTCACCGAGATCGGTCACAACGAAATCTTCGGCGCAGACATCGATTCGGCAATTCCCGCGACGAAGTTGCAGTGGATTGAGGGTTACAATCTGTTGATGGCCTCTGGGTCCCACAGCGGTCCCTCCGGCGTTTCCGGTAACATACGGTTGTGGGATGTTCGATCCGGAAACGTTGTGTGGGAAATTTCTGAGAAGGTGGATTGTTTCGCTGACGTGGCGGTTTGCGATCCGTTGTCGGTAATTTTTAAGGTTGGGGTGAATTCGGGCGAAGCTTCTTACGTGGACATGCGGAATTTGAGCACCGAGAGCGCGTGGGTTTGTCTTGGGGATAAAAGAAAGGTTACGAACAGTGGGAAAAAGGAAGGGATTGGGTCGAAAATCGAAACGCAGGGGAATCAAGTGTTTTGCACCAAGGGTGGTGACGTGGAGCTCTGGTCTGAGGTTATCATGGGTGGTGGTGGCAATGGTGGAAGGATATTCAAGAAGAACTTGATGGGTAGAATGAGGGACATGGGTGGTGCAAAGATCACAAATTTGGCCTTTGGAGGAAGCACCATGTTCTTGACCAGAAAGGATCAACAATGTGTTGAGGTCTGGCAGAGTTCTTCCAGGGAATTTTGA 1380 0.5355 MPPFAGSEPAGFPKPDSNIVSIDVGGQLFQTTKQTLTSAGPKTFFSRIAESSGIYAPFIDRDPEIFSLLLSLLRTGNLPSKAKAFDLQDLIIESKFYGIESLLINSLSNPSQLEPFNLQKSLLLPLNGRDSPSALAADAACGALHVAHGSKITSFDWSLRRKATVLTHFTAVDSLLALSPTLVAAGANDFSGLQILDLENGRVKETLNWENVTKSGSTVQAIGSSSENMFVSFESSRRNSNSIMVYDLHSLTPVTEIGHNEIFGADIDSAIPATKLQWIEGYNLLMASGSHSGPSGVSGNIRLWDVRSGNVVWEISEKVDCFADVAVCDPLSVIFKVGVNSGEASYVDMRNLSTESAWVCLGDKRKVTNSGKKEGIGSKIETQGNQVFCTKGGDVELWSEVIMGGGGNGGRIFKKNLMGRMRDMGGAKITNLAFGGSTMFLTRKDQQCVEVWQSSSREF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03839 459 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 14 456 IPR045068 -
Vian1g03839 459 Pfam BTB/POZ domain 20 106 IPR003131 GO:0051260
Vian1g03839 459 Gene3D Potassium Channel Kv1.1; Chain A 13 110 IPR011333 -
Vian1g03839 459 Gene3D - 136 459 IPR015943 GO:0005515
Vian1g03839 459 CDD BTB_POZ_KCTD-like 20 97 - -
Vian1g03839 459 SMART BTB_4 18 114 IPR000210 GO:0005515
Vian1g03839 459 SUPERFAMILY POZ domain 17 104 IPR011333 -
Vian1g03839 459 SUPERFAMILY WD40 repeat-like 147 351 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03839 Vian-Chr1 61440702 61442081 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03839 - - gmx:100797171 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03839 1 61440702 61442081 Vian1g03839 1 61440702 61442081 ECH