Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03826 ATGGGACAAGAGTTGGAGCTGGATCTTGATGACAAGTCTTCAGTGGGTCTGAGTCCAAATACTGTTCTTCCATCTCATCAATACTGTGTGAATGTGAAGAAGATATCAAAGAAAGGGAAACCCTCTGGAAAAGATGAATTTTTTACTCTCAAGGAGGGCTTTGCTGAGATCAAATTTGCTCGCTTCCGCAGTTCTTCGTGTAAGAATCATCTCACTAAACCTCATGGATTGGAAGGTAATATAGAAACCAGGCCCACTTCCATGTATCGGAGTTCAGAAGAAGTGAAAAGCAGAAAGAAAATGGGCACCATGGTAGAGGGAAGGAAAAAGATAGAAATTTCAAGGAGAAGTGATGCCTCCTTCACAGGTAGCATTGTTGATTCGTTGTGTGGTTCAGATGATGAAGGTTCTGGGGTTAGATCTCCAGATAGCTTTATTGAAATTTGTATAAATTCAGATGTTAAAAATAAGAACTCTACCACAGCACGAGGGAGAGTTTCTACAAATTTGAAGCCCAGAAGTGATAAAGTTGCTGATTCTGTAAGCAATGGCAATTGTTGTGTTGAAAAGGACACAGTCCACTCGCTTCAAAAGTCATTCTCGGCTAAGGCAGAAGTCTCTCACTTGCCATCTCCATTGGGAAGTGATTGCTCATCAAGCGCAAGTCCAAAAGTCCAATTCATCCATAGCAGGAAAAGGCTGAATCACTTCACAAAGTCAAAATCACTGAGAAGTCCAGTGAGTCAGGTACCGGAGAGTAATGATATCAAATCAAACGAGAAAGCAAACATTGCAAGAAATAGGACTTATCAGAAATCACTGTTAAATGACTTGTCCAAAACAGGAAAGCATTCTGATATCATTTCTGAGTTTATCAACAGAGAAATCCAGTATTCAGGTATAGCTTCTTCACCAGTTCACCTGCATGGCAATCTCAAGTTCGAAAATAAACATGGAGTGCCGTTTTTTGAGTTCAAGGTGAAGTGCCCTGAAGATGTGTTTGTGGCCAAGACATGGAGAACAGGTAATGCTTTCAACTGGGTATATACCTTTCATTCCATTGATAATAGAAAGAAGAGCAATGCTACTGGGTTGGGATACCATGATTTTGACAAAGATTCCTCAACAGTTGCACAGATGCTAGTTTCAGGTAATTTATGTTCTGAACTAGAAGGCAAAGTATTTGACAACTCTATGGTGTCAGAATTTGTGTTATACGATTTTACACACTCAAGACAAAGCGTTTCGCATGAGAAGAAGTCTTTCAGTGAACCAGATGCTTCTAAAACTCTGAAAGCTTCCCATATTGGATGGAAAGAAGAAACTATGGGGTTGGATGAGAACCGTGCAGTAAAAAACAAACCTCAAGACAAATCTCCACTGAGCAATGTTGAATTTAATGATTTAAGTTCTTTTCCTTGCTCATCCGCAGAATGCCATTCAAACCTTGAAATTGCTGCCATTGTCTTGCAAATTCCGTTTTCCAAGAGAGAAAGCTTGAAGTACAAAAGAGGGGACATAATGAGTGGTAAAGAACATTCCAACATAAGAGATCTATCTGCCGAAATAGATAAAAAGAGTCTTCATCACAGCAAAATCCAGGAACAGGTGAAGGTGGTAATACCAACTGGTAATCATGGTTTGCCAAATGCTGAAAGCCAGGGACCCTCATCGTTACTTGATCGACTGCGACACGGTGGAGGTTGTGACTGTGGTGGTTGGGACATGGCCTGTCCCCTTATTCTTTTAGGCAATCCTAGTATTCAATTTGCTGAGGACTGCCCACTTTTTGAGGAACATCAACCGTTGGAACTTTTTGTTCAGGGAACAAAAGGAAGCAGTCCTACCTTCAGCATGACAAGAATTGAAGAGGGGCATTATGCTGTTGATTTTCATGCACAGTTATCTGCTTTACAAGCATTCTCAATCTGTGTTGCCATTTTGCATGGAACTTCGGCCTCCAGCAGTGGAGGGCATGAGAAAAACCAGCAGTCATCTCAATGCAGTTCACTGAAAATGCTTCTTGAGGAGGATGCAGATTTTATTTTCAAATCAGTCACAACTGAGAAGAAAACTCGTTGCAAGAATCCAAAAGTAGCTCCTCGATCCTATGTGCTGAACCCACCCTTTTCTCCTATTGCACGTGTATAA 2151 0.4096 MGQELELDLDDKSSVGLSPNTVLPSHQYCVNVKKISKKGKPSGKDEFFTLKEGFAEIKFARFRSSSCKNHLTKPHGLEGNIETRPTSMYRSSEEVKSRKKMGTMVEGRKKIEISRRSDASFTGSIVDSLCGSDDEGSGVRSPDSFIEICINSDVKNKNSTTARGRVSTNLKPRSDKVADSVSNGNCCVEKDTVHSLQKSFSAKAEVSHLPSPLGSDCSSSASPKVQFIHSRKRLNHFTKSKSLRSPVSQVPESNDIKSNEKANIARNRTYQKSLLNDLSKTGKHSDIISEFINREIQYSGIASSPVHLHGNLKFENKHGVPFFEFKVKCPEDVFVAKTWRTGNAFNWVYTFHSIDNRKKSNATGLGYHDFDKDSSTVAQMLVSGNLCSELEGKVFDNSMVSEFVLYDFTHSRQSVSHEKKSFSEPDASKTLKASHIGWKEETMGLDENRAVKNKPQDKSPLSNVEFNDLSSFPCSSAECHSNLEIAAIVLQIPFSKRESLKYKRGDIMSGKEHSNIRDLSAEIDKKSLHHSKIQEQVKVVIPTGNHGLPNAESQGPSSLLDRLRHGGGCDCGGWDMACPLILLGNPSIQFAEDCPLFEEHQPLELFVQGTKGSSPTFSMTRIEEGHYAVDFHAQLSALQAFSICVAILHGTSASSSGGHEKNQQSSQCSSLKMLLEEDADFIFKSVTTEKKTRCKNPKVAPRSYVLNPPFSPIARV 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03826 716 Pfam Domain of unknown function (DUF3527) 305 650 IPR021916 -
Vian1g03826 716 PANTHER EXPRESSED PROTEIN 7 136 - -
Vian1g03826 716 MobiDBLite consensus disorder prediction 76 103 - -
Vian1g03826 716 SUPERFAMILY Tubby C-terminal domain-like 612 650 IPR025659 -
Vian1g03826 716 MobiDBLite consensus disorder prediction 89 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03826 Vian-Chr1 61302850 61305907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03826 - - gmx:100811734 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03826 1 61302850 61305907 Vian1g03826 1 61302850 61305907 ECH
Vian10g00269 10 2484529 2487031 Vian1g03826 1 61302850 61305907 PCT