Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03824 ATGGTTGAATCAATTGCCGCAACTTCACTCCTTGGCCACCGTCCAATTTTTGGTGGAATTTTGGCCAGGGATGTATCTGTTAAACGAAAATCTTTGAATTCTTGTCGGCTGCCAACAACCGAGTTTCTTGGTTGTGGAAGGATTGTGGTTTCTTTGACTTTGCCTAAATCTGATAAGCAAGATAGGGTTATGTTCTCATCAATTAAGGCCTTGGCTGTGGAGTTAACAAGAGAAGCACATGCTTACAGGGAAGAGAAATTGCCCAATAGAGATAATAGGAGGATTGATAGTGGATTTGATCAAAGGCCTGATTCGTGGCCTCCGGCTAATAGAGCCGATAACCCCTCCCTCCGGAATCCGTTGCTCCGGCATGAGAGGATGGGGTGTGGTTGGTTGGGTGCTATATTTGAGTGGGAGGGAGTTCTTGTTGAGGACAATCCTGATTTAGAGAAGCAGGCTTGGCTGGCACTCTCCCAGGAAGAAGGCAAACCTTCTCCTCCTGCTTTTATCCTCAAGAGAGTAGAAGGCATGAAGAATGAACAGGCAATTTCAGAAGTTCTGTGTTGGTCGAGGGATCCGGCGCAATTAAGAAGAATGGCTAATAGAAAGGAAGAAATCTACCAAGCTTTACAGGGTGGGATATATAGGTTCATGTCTGGTTCCAAGGAATTTGTTAGTGTTTTAATGCATTATAAGATACCAATGGCATTGGTTTCCACGCGTCCTAGGAAGGCTATTGAGTCCGCTATAGGGGAGATCGGGATTGAGGACAATTTCAGTGTCGTTGTGGCGGCAGAGGATGTTCACAGGGGAAAGCCTGATCCTGAAATGTTTGTTTATGCTGCACAGCTTTTGAACTTAATACCTGAGAGGTGCATTGTGTTTGGAAACTCCAATCTAACAGTGGAGGCTGCACACGAAGCGCGGATGAAATGTGTGGCTGTTGCTAGTAAGCATCCTGTCTATGAGCTTGGGGCTGCAGACTTGGTTGTCAGGCGTCTGGACGAGCTTTCTGTGGTTGATTTGAAGAATCTCGCAGACATTGAAATGACTGAATTTGGGTCTCCAGAGCCTGAGGTGGAGCTGGAGATGGAAGAAGATTATGACCCATCATCCGTTGATGACAATTTCTGGTAA 1137 0.4591 MVESIAATSLLGHRPIFGGILARDVSVKRKSLNSCRLPTTEFLGCGRIVVSLTLPKSDKQDRVMFSSIKALAVELTREAHAYREEKLPNRDNRRIDSGFDQRPDSWPPANRADNPSLRNPLLRHERMGCGWLGAIFEWEGVLVEDNPDLEKQAWLALSQEEGKPSPPAFILKRVEGMKNEQAISEVLCWSRDPAQLRRMANRKEEIYQALQGGIYRFMSGSKEFVSVLMHYKIPMALVSTRPRKAIESAIGEIGIEDNFSVVVAAEDVHRGKPDPEMFVYAAQLLNLIPERCIVFGNSNLTVEAAHEARMKCVAVASKHPVYELGAADLVVRRLDELSVVDLKNLADIEMTEFGSPEPEVELEMEEDYDPSSVDDNFW 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03824 378 Pfam Haloacid dehalogenase-like hydrolase 151 315 IPR041492 -
Vian1g03824 378 MobiDBLite consensus disorder prediction 84 117 - -
Vian1g03824 378 NCBIfam HAD-IA family hydrolase 250 315 IPR006439 -
Vian1g03824 378 SUPERFAMILY HAD-like 134 337 IPR036412 -
Vian1g03824 378 CDD HAD_BPGM-like 194 317 - -
Vian1g03824 378 MobiDBLite consensus disorder prediction 84 100 - -
Vian1g03824 378 Gene3D - 134 332 IPR023214 -
Vian1g03824 378 Gene3D Putative phosphatase; domain 2 144 217 IPR023198 -
Vian1g03824 378 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03824 Vian-Chr1 61282810 61283946 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03824 K22912 - gmx:100798181 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03824 1 61282810 61283946 Vian1g03824 1 61282810 61283946 ECH