Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03818 ATGCTTTCTTCTTCAACCACTCGCATCTTCATCCACACAACAACTGCTATAAGATTAGCTTCTTCCACCTCCTCTTCTTCTTCTTCCTCCTCTCTTCGATTTCTCTCCAACCCTACCCTCTTCCGCCCTGTTTTGCACGCTTATTTCAAACCGCTTCCTTCAACCTCGTCCACCTCTTTGTTCTCCTCCTTTAGAACCGATCACACTATGGCCACCTCAAGCGCCAAATCAGTCCACGATTTCAACGTTAAAGATGCTAAGGGAAATGATATTAATCTTGGTGACTACAAAGGGAAGGTCCTTATAATTGTCAACGTTGCCTCACAATGTGGCTTGACTAATTCGAATTACACAGAGCTGAGTCAGTTATACGAGAAGTACAAACAAAAAGGTCTGGAGATTCTAGCATTCCCATGCAATCAGTTTGGGGCACAGGAGCCTGGATCTAATGAACAGATACAAGATTTTGTCTGTACTCGCTTCAAGGCTGAGTTTCCCGTTTTTAACAAGGTTGATGTGAATGGTGACAGTGCTGATCCACTCTACAAGTATCTAAAATCAAGCAAAGGTGGACTCTTCGGGGATAATATCAAATGGAACTTCTCCAAGTTCCTTGTTGATAAGGAGGGGAAGGTTGTTGATCGCTATGCACCCACAACTTCTCCTCTGAGCATTGAGAAGGACTTGTTGAAGTTGTTGGATGCTTGA 708 0.4364 MLSSSTTRIFIHTTTAIRLASSTSSSSSSSSLRFLSNPTLFRPVLHAYFKPLPSTSSTSLFSSFRTDHTMATSSAKSVHDFNVKDAKGNDINLGDYKGKVLIIVNVASQCGLTNSNYTELSQLYEKYKQKGLEILAFPCNQFGAQEPGSNEQIQDFVCTRFKAEFPVFNKVDVNGDSADPLYKYLKSSKGGLFGDNIKWNFSKFLVDKEGKVVDRYAPTTSPLSIEKDLLKLLDA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03818 235 Pfam Glutathione peroxidase 78 186 IPR000889 GO:0004602|GO:0006979
Vian1g03818 235 PRINTS Glutathione peroxidase family signature 132 148 IPR000889 GO:0004602|GO:0006979
Vian1g03818 235 PRINTS Glutathione peroxidase family signature 96 113 IPR000889 GO:0004602|GO:0006979
Vian1g03818 235 PRINTS Glutathione peroxidase family signature 197 206 IPR000889 GO:0004602|GO:0006979
Vian1g03818 235 SUPERFAMILY Thioredoxin-like 77 234 IPR036249 -
Vian1g03818 235 Gene3D Glutaredoxin 69 235 - -
Vian1g03818 235 PANTHER GLUTATHIONE PEROXIDASE 68 233 IPR000889 GO:0004602|GO:0006979
Vian1g03818 235 ProSitePatterns Glutathione peroxidases signature 2. 135 142 IPR029760 -
Vian1g03818 235 ProSiteProfiles Thioredoxin domain profile. 72 235 IPR013766 -
Vian1g03818 235 ProSiteProfiles Glutathione peroxidase profile. 68 235 IPR000889 GO:0004602|GO:0006979
Vian1g03818 235 ProSitePatterns Glutathione peroxidases active site. 98 113 IPR029759 -
Vian1g03818 235 CDD GSH_Peroxidase 77 229 IPR000889 GO:0004602|GO:0006979
Vian1g03818 235 FunFam Glutathione peroxidase 69 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03818 Vian-Chr1 61238158 61239982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03818 K00432 - gmx:100306295 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03818 1 61238158 61239982 Vian1g03818 1 61238158 61239982 ECH