Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03814 ATGGAAGAAGAGGGCAAAATAACAAAAGGAAAATATGCTGCTGATATTTCCTCCATAAGAGAAGCACAAGATCGAATCAAATCATTGGTTCATAAAACTCCGCTTCTGTCCTCCACCTCGCTGAATGTTTTGTCAGGAAGGCAGCTCTACTTTAAGTGTGAATGTTTACAAAAGGGGGGAGCTTTTAAATTTAGAGGTGCCTGCAATGCTGTGTTCTCTCTCAATGATGAAGATGCTTCTAAAGGGGTTGTAACACACAGCAGTGGAAACCATGCTGCAGCATTGGCTTTGGCCGCTAAACTACGGGGGATCCCTTCATATATTGTTATTCCAAAAAATGCCCCAACTTGCAAAGTTGAGAATGTAAAGCGGTATGGTGGTCAGATTGTCTGGTCTGAGCCCTCTGTTCAATCCAGGGAAGAAGTTGCAAACAAAGTGTGGCAAGAAACTGGTGCTATCTTTATACATCCGTATAATGATGGACGCATATTAAGTGGACAGGGTACCATATCCCTGGAGATTCTGGAGCAAGCCCCACATTTAGATACGCTAGTGGTACCCATAAGTGGTGGTGGTTTGATATCTGGAATAGCATTGGCTGCCAAGTCTGTCAACCCAGCTATTCGTATTTTAGCTGCTGAACCTAAAGGAGCTGATGATGCCGCCCAATCTAAAGCAGCTGGGAGGATAATAAGATTGCCTGAGACAGATACTATAGCTGACGGTCTTCGAGCATTTCTTGGAGATTTCACTTGGCCTGTAGTACGAGATCTTGTTGAGGACATTATAACTGTTGAAGACAGTGAAATAATCAAAGCTATGAAACTGTGTTTTGAAATTCTTAAGGTTGTTGTAGAACCAAGTGGAGCAATTGGCCTTGCTGCTGTTCTATCCGATACCTTCCAGAATAATCCTTCTTGGAAGGAATGCAACCACATAGGAATAGTACTTTCAGGAGGCAATGTTGATCTGGCCGTGCTTTGGGATTCTTTGAAGAAAGGGAAATGA 1008 0.4296 MEEEGKITKGKYAADISSIREAQDRIKSLVHKTPLLSSTSLNVLSGRQLYFKCECLQKGGAFKFRGACNAVFSLNDEDASKGVVTHSSGNHAAALALAAKLRGIPSYIVIPKNAPTCKVENVKRYGGQIVWSEPSVQSREEVANKVWQETGAIFIHPYNDGRILSGQGTISLEILEQAPHLDTLVVPISGGGLISGIALAAKSVNPAIRILAAEPKGADDAAQSKAAGRIIRLPETDTIADGLRAFLGDFTWPVVRDLVEDIITVEDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQNNPSWKECNHIGIVLSGGNVDLAVLWDSLKKGK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03814 335 Pfam Pyridoxal-phosphate dependent enzyme 29 317 IPR001926 -
Vian1g03814 335 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 326 IPR036052 -
Vian1g03814 335 FunFam L-threonine dehydratase catabolic TdcB 135 323 - -
Vian1g03814 335 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Vian1g03814 335 Gene3D - 25 323 IPR036052 -
Vian1g03814 335 CDD Thr-dehyd 16 323 - -
Vian1g03814 335 Gene3D - 62 158 IPR036052 -
Vian1g03814 335 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 8 326 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03814 K12235 - gmx:100799758 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03814 1 61203368 61205404 Vian1g03814 1 61203368 61205404 ECH