Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03786 ATGGTTGTAATTAGCGAGCTTTTCAACTTTGCATTGCCTCCTCTTTCACTACTTCTCCTCACCATTTTAATGCTACCTTCGCTCATCTTCAAGCTGCTTATGCATGTCAGAAAATCGCTGCGCAAAGAAAACGTGGCAAGCAAAGTTGTATTAATCACCGGAGCAGCCTCAGGAATTGGCGAGCAAATAGCTTATGAATACGCAAGGCGAGGAGCAAAGCTTTCCCTGGTTGACATAAGAAAGGAGAAACTCGTGGCAGTGAGTGATAAAGCAAGATCTCTGGGTTCTCCTGATGTTACCACCATTGCTGCTGATGTATCCAAGGTCCAAGAATGCAAACGCTTTGTTGACGAAACATTCAACTACTTCGGAAGACTGGATCATCTGGTAAATAATGCAGGAATCAGTGGTAAGCCTGTAACTGTGGAGAATATGCGTGATATTTCTGAATACACTGCAGTTATGGCGAGCAAAGCAGCGATAACAAACTTCTTTGAGACTCTGAGAATGGAAGCTGGAACTGCATTCGGCATAACAATTGCCACGCCCGGTTTTATCAAGACAGACCTTACATTAAAGGCCAAATTTGAATTAAAGGGTGTTATGGGAACAGTTCCAATGGGGTCAGCTAGTGAATGTGCTAAAGCCATAGTTGAAAGTGCATGCAGGGGAGATATGTATGTTACAGATCCTTCTTGGTACAAAGTCTTGTTTCCTTGGAAGGTGCTTCATCCTCAAATCGTAGATTGGGCCCTCAACTTGATCTGTCCAAACAAGTCTGCCATGAAAGGCAATCTCATGATGCCAGAGCATAAGACAGAATAA 825 0.4339 MVVISELFNFALPPLSLLLLTILMLPSLIFKLLMHVRKSLRKENVASKVVLITGAASGIGEQIAYEYARRGAKLSLVDIRKEKLVAVSDKARSLGSPDVTTIAADVSKVQECKRFVDETFNYFGRLDHLVNNAGISGKPVTVENMRDISEYTAVMASKAAITNFFETLRMEAGTAFGITIATPGFIKTDLTLKAKFELKGVMGTVPMGSASECAKAIVESACRGDMYVTDPSWYKVLFPWKVLHPQIVDWALNLICPNKSAMKGNLMMPEHKTE 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03786 274 Gene3D - 149 261 - -
Vian1g03786 274 Gene3D - 30 148 - -
Vian1g03786 274 PANTHER RETINOL DEHYDROGENASE-RELATED 156 260 - -
Vian1g03786 274 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Vian1g03786 274 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Vian1g03786 274 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 44 253 IPR036291 -
Vian1g03786 274 Pfam short chain dehydrogenase 48 140 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03786 Vian-Chr1 60841561 60843285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03786 45 131 Acyl Lipid Metabolism Gene Families AT3G12800 39.080 1.77e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03786 K22418 - gmx:100808990 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03786 1 60841561 60843285 Vian1g03786 1 60841561 60843285 ECH