Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03784 ATGCCCGTACGCCGTCTCAGACTCGATTCCGACACCGACGAAGAAGAACAACACCCACTCCAACCCCAATCCCAACCACGGCCACAGCCACAGCCACATTTTCCGGAGGTTCCCGTTGAAATATCCGACGACGAATTCATCGACGTCGCTGAAAGCCTCTCTCCGCCTTCCCCTTCCTGTCCAGTCTCTGACTTCCTCCGCCGCCTCGGTCTGTCTCTCAAGAGAGGATGGCTCGCTTCCTGTCTCCGCCAACTCCAAGTCTCTGTTACGTCCTTCGAACACCTCGACGTTGCCGCGAAAGCCAAACGCTGTTTCGAGCAGTTCCTCTTCGCCGACATGAATTTATGTGGCGCCGGCGTGCTCCCTCCCGCCGTCGATTCCATGCACCTTCGCGTTCTCCCTGGTCCCTACGTTTTGCAGGTTGATGAAATAATTAATATCACTTGTCCCCTACGAGGAAGATACGAACAAGCACCTCCTGGACCTAAGAGGTGCCTCAAGTTGTCAATGACTGATGGTGTTCAGAGAGTCTTTGGAATGGAGTATAGGCCTATCAAAGCGCTTGAAGTTTGTGCCCCTTCTGGTTTGAAGGTTGCTATCTCTAATGTACATGTGCGTCGTGGACTTCTAATGTTGGTCCCTGAAGTCATTGAAGTTTTGGGGGGATTGGTTGAGGAGCTGGATGCTGCTCGAAAACGACTGGTTGAAGAAATAAACAAGCCACCTAGGGGGAAAAGAAACAAAAATGGAGAGCTCCCTCCTTTAGCTACCAGAGCAACACTTGCTGCATGGCCTCCAGGTGGGGTTGATAATCGTGCGTGCAATGGCTCCACACTGCACAGTACTGTTTCTTCCCAAGAAAACAACCAAGGTTCTGGCCGAAGCATACCCGGCACTGTTAACAGCTTAACAACTGAAGATACTTTGTCCATGGGTGCACACAGTGCTCCTGCTAATTCAATACACCGCATGTCATCACATTCCATGGGTGCACACAGTGATTTAACTACAGGTGCTGGCCGAAGCATACCTAGCACTGTTAACAGCTTAACAACTGAAGACACTTTGTCCATGGGTGCACACAGTCCTCCTGCTAATTCAATACACTGCATGTCATCACATTCCAACGCCATGAATGTGGATACGCCTAGGGATACCAATCCTGTATTCCATGCTACTCCTATGTCTAACCAGCTCTCTTCTGTAATCTCAAAGGCCAAGGAGATGCACATAGATGCTTCTAATGCAAGGGAATGTTCTATTGACAATCGGTCTTCTAACATGGATTCAAATGTTGCAGCTGCACATATTGACACAGTTAATATAACACCAGAAAATGCTGTAGGTATTGAGTGCTCTCCTGTTGTTTACAATGTTGAGACAGATTCAGATAGAACTCCTGTTGCTACAGATACTACTCTTCTGCATAGAACCTCATCCACTGCTTTAAACACTAGCGATGTCCAGATGGTTGATGCCCTTAACCATCCACTCATACTGTCTAGAGACCAAGAGGTTCCTTTCACATACATAGCTAGTTTGTCAGTCAAGTGGGCTAAAATGAAGGGGGAAGCTCCTTCCGTTCAGGGGAAAATCAAGTGTTTTTTGACTGGTGTAAAAGGATTCCAGTTTAAGAAAAGGACAACATATGAACTTCAGGCGTATGTAGACGATGGTAGCCTTATTTCTGAAATCCTTGTCGATCATAATGTTGTAGAGAAAGGAATTGGTTATTCTCCTGAGGAGGTAACTGCTGCTCTTTCTTCCCCTGACACAAAGATTGTCCACCAAATGAAGGATACAATGCGTAAATTTCAAGCCTTTTTAGCAAACTTTGAGGGAATAATTCTTGTGGAGTTCAATAAAAAAAAAACCCTTCCACTTGCTCTAGAGATGAGTCAAGGTTGTCCTCAGTCTGATGCATGGTTACTTCTGAGAAGGCTGAAGTCTCTTCAACCTCCACTAGTTCAAAACCCTACGGATCCGATTGAATTATCCCCGTAA 2004 0.4666 MPVRRLRLDSDTDEEEQHPLQPQSQPRPQPQPHFPEVPVEISDDEFIDVAESLSPPSPSCPVSDFLRRLGLSLKRGWLASCLRQLQVSVTSFEHLDVAAKAKRCFEQFLFADMNLCGAGVLPPAVDSMHLRVLPGPYVLQVDEIINITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCAPSGLKVAISNVHVRRGLLMLVPEVIEVLGGLVEELDAARKRLVEEINKPPRGKRNKNGELPPLATRATLAAWPPGGVDNRACNGSTLHSTVSSQENNQGSGRSIPGTVNSLTTEDTLSMGAHSAPANSIHRMSSHSMGAHSDLTTGAGRSIPSTVNSLTTEDTLSMGAHSPPANSIHCMSSHSNAMNVDTPRDTNPVFHATPMSNQLSSVISKAKEMHIDASNARECSIDNRSSNMDSNVAAAHIDTVNITPENAVGIECSPVVYNVETDSDRTPVATDTTLLHRTSSTALNTSDVQMVDALNHPLILSRDQEVPFTYIASLSVKWAKMKGEAPSVQGKIKCFLTGVKGFQFKKRTTYELQAYVDDGSLISEILVDHNVVEKGIGYSPEEVTAALSSPDTKIVHQMKDTMRKFQAFLANFEGIILVEFNKKKTLPLALEMSQGCPQSDAWLLLRRLKSLQPPLVQNPTDPIELSP 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03784 667 MobiDBLite consensus disorder prediction 1 37 - -
Vian1g03784 667 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 507 648 IPR032199 GO:0000166
Vian1g03784 667 MobiDBLite consensus disorder prediction 272 303 - -
Vian1g03784 667 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 58 650 - -
Vian1g03784 667 MobiDBLite consensus disorder prediction 1 20 - -
Vian1g03784 667 MobiDBLite consensus disorder prediction 274 303 - -
Vian1g03784 667 Pfam RecQ mediated genome instability protein 68 233 IPR013894 -
Vian1g03784 667 FunFam RecQ-mediated instability protein (DUF1767) 112 238 - -
Vian1g03784 667 Gene3D - 112 238 IPR042470 -
Vian1g03784 667 SMART DUF1767_2 63 156 IPR033472 -
Vian1g03784 667 MobiDBLite consensus disorder prediction 323 347 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03784 K10990 - gmx:100803734 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03784 1 60829074 60832409 Vian1g03784 1 60829074 60832409 ECH