Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03783 ATGTCTTCTGAAACCCTAGAAAACGAGAGGTCACAAGCGGAAGAAGAAGTCCAAGCTGAGGAAAATCACACCGAACAAGAAGACACTCCGATGAAGAACGACGTGAGCGAAAACGGAGATGTAAAAGAAAAGGACGAGGTAGAAGAAGAGACTGATGAGCGTGACGAAGCGAAGTCTAGCAAGTCACCAGAAGAAAGCGGTTACGCTACGCCAACTACTAAGAGACCAACTAGGGAGAGGAAAACGGTGGATAGGTACACTGTTTCTTCGCCCGATAAGTTTCACAAGTCTTCCTCTCTCAAAGCTTCGTCAATTGAAAAGGGCAACGGTACGCAGCTCAAGGACATTCCAAATGTGGCTTTCAAGTTATCAAAGAGAAAAGCTGACGAGAACCTGCATGCGCTTCATAAAATACTCTTTGGGCAAAGGGGAAAGGCAATCGCAGTAAAGAGAAATATAGGACTGTTTTCTGGCTATGTGTGGACTGACAATGAGGAAAAACTGAAAGCAAAGACAAAGGAGAAGATTGAGAAATGTGCGAAAGAAAAGTTGGTGGACTTCTGTAATGTGCTTAATATTCCGATAAATAAGACCACTATGAAGAAAGTAAAAGTTTATCTAACATTTTTCCATCCTTGTATTGTAACAATTGCTCTTTATAAACAAGTTATGATCAATGTGGCATTTCAGGAGGAACTGTCTGCGAAGTTGTTTGAATTTTTGGTGTCCCCGCATGCTACAACTGATGTTCTTCTAGCCGACAAAAAAATGAAAGGTAAAAAGCGAGGCAGAAAGCCAACCCCAAACAAATCTGAAACACCTGCCAAGAAGCAAAAGAAAACCTCAATAGCTCGGAAAAAGCAAAAGCAGTCTTCTGATGTCGAGGAGAGTGATGTATCTGAACCTTCCGAGGCAGAAGTTGATTCTGAGGAAGATGATGTTCCAAAAAGTGAAAGTGATCATGATGACGAAAACATGTCAGAGAAAGAGGAAGATAAAGAAAAGGCTCACACTGGGTCTTCGACGAAGACTCTGAATGAAGACCAAGACGAACCAGCAAAGAAGACTACTACAGTAGAGACAACCAAGAGCAATGAAAAAACTCCAAAAAGATCTACTTCAAAAATAGCTCGTAATGTCAATACTTCGAAGTCCAAGCAGTCTACTTCCAATAAACAGAAAACAGTAAGGGAAAACCAGAATTCGAAAAGGAAGGTTGCAGACAAAAAACGAACAGACAAGTCTTCAAAGGCTTCAGTTAAGGATGGAGGAAAAGGTAAACGTAGCGAGAAAGCTGAAGACGGACCTAGTAAGAATGAAATGCATCGAGTGGTAGTTGATATTTTAAAGAAAGTAGATTTCAATACGGCAACTTTATCCGATATCCTGAAACAACTTGGTACTCATTTTGACGTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAACATGTCAGATAACGATAAGGAGGAAACATCAAATGTTGGAGACGATGACGGTGAAGACGAGGAATTGTTGTAG 1545 0.4052 MSSETLENERSQAEEEVQAEENHTEQEDTPMKNDVSENGDVKEKDEVEEETDERDEAKSSKSPEESGYATPTTKRPTRERKTVDRYTVSSPDKFHKSSSLKASSIEKGNGTQLKDIPNVAFKLSKRKADENLHALHKILFGQRGKAIAVKRNIGLFSGYVWTDNEEKLKAKTKEKIEKCAKEKLVDFCNVLNIPINKTTMKKVKVYLTFFHPCIVTIALYKQVMINVAFQEELSAKLFEFLVSPHATTDVLLADKKMKGKKRGRKPTPNKSETPAKKQKKTSIARKKQKQSSDVEESDVSEPSEAEVDSEEDDVPKSESDHDDENMSEKEEDKEKAHTGSSTKTLNEDQDEPAKKTTTVETTKSNEKTPKRSTSKIARNVNTSKSKQSTSNKQKTVRENQNSKRKVADKKRTDKSSKASVKDGGKGKRSEKAEDGPSKNEMHRVVVDILKKVDFNTATLSDILKQLGTHFDVDLMHRKAEVKDIITDVINNMSDNDKEETSNVGDDDGEDEELL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03783 514 MobiDBLite consensus disorder prediction 500 514 - -
Vian1g03783 514 MobiDBLite consensus disorder prediction 1 106 - -
Vian1g03783 514 FunFam DEK domain-containing chromatin associated protein 425 491 - -
Vian1g03783 514 Pfam DEK C terminal domain 436 488 IPR014876 -
Vian1g03783 514 MobiDBLite consensus disorder prediction 74 91 - -
Vian1g03783 514 MobiDBLite consensus disorder prediction 347 373 - -
Vian1g03783 514 MobiDBLite consensus disorder prediction 492 514 - -
Vian1g03783 514 SUPERFAMILY DEK C-terminal domain 429 490 - -
Vian1g03783 514 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 435 490 IPR014876 -
Vian1g03783 514 MobiDBLite consensus disorder prediction 253 442 - -
Vian1g03783 514 Gene3D - 427 491 - -
Vian1g03783 514 MobiDBLite consensus disorder prediction 374 396 - -
Vian1g03783 514 MobiDBLite consensus disorder prediction 8 42 - -
Vian1g03783 514 MobiDBLite consensus disorder prediction 297 318 - -
Vian1g03783 514 MobiDBLite consensus disorder prediction 319 341 - -
Vian1g03783 514 MobiDBLite consensus disorder prediction 397 442 - -
Vian1g03783 514 PANTHER DEK PROTEIN 10 506 IPR044198 GO:0003677|GO:0006325
Vian1g03783 514 Coils Coil 3 26 - -
Vian1g03783 514 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03783 Vian-Chr1 60822291 60826797 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03783 K17046 - gmx:100785644 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03783 1 60822291 60826797 Vian1g03783 1 60822291 60826797 ECH