Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03781 ATGGATGTCTCTGTAAAGGAGGAAGTATCGGAGGCTCCCATTATAACAAAGAGGAAAACGCGAACCGAAACTGTTACGGCGCCTCCTCCTGACTCCGTCATCGAACTCAGCGACAGCGATTCGGATAGCGATTCGGAGAACGATGTTGATTCGGAGAACGGAAGAAGTCCTTCTACGAAGCGAAGGACGGAGGGTGAAATGGTTTTGCCTGTTGGATTCCTCAGCCCTCTCCCTCCGGAGGCCTCTCCACCGGCACCTCTGCTGGCTTTGCCGGCGCCAGAGTGGGCTTCTAATTCCGCATCACGATCTAACCATACATTGGGAGTGAATAGCTGCAAGCAGTTCTGGAAGGCTGGGGATTACGATGGTGCCCGCTGTGGTGGTTCTGATTTTTCAACAGTTGGTATGGATCATGTCAGAGTTCACCCCAAGTTTTTACACTCTAATGCCACAAGCCACAAGTGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAATTCATTGGATGAGGTTTGTAATGGGGCGACATACGTTAATGTAGATATGCTTATAAATAAGAAAGATGGCTCCAGGATGTTGCTGATCGAAGATAATGGTGGTGGGATGGATCCTGAAAAAATGCGTCAATGCATGTCACTGGGGTATTCTGTGAAAAGCAAATTGGCGAACACAATTGGACAATATGGAAATGGCTTTAAGACAAGTACCATGAGGCTAGGGGCTGATGTAATTGTTTTCTCCCGTTTTCCGGGGAAAGATGGGACAAGCTCTACTCAAAGCATAGGCTTGCTGTCTTACACATTTTTGAGGAGTACGGGAAAGGAAGACATTGTAGTACCCATGTTGGACTATGAAAGAAGAGGACAACAATGGAATAAGATAATACGAACTACTCTGGATGATTGGAATAAAAATGTTGAAACAATGGTACAGTGGTCACCATTTTCTGATGAGGCTGATCTTCTTCGTCAGTTCAACTTGGTGAAAGATCATGGTACACGAGTGATCATATACAATCTTTGGGAAGATGACCAAGGTCAACTGGAACTTGATTTCGATGCTGATCCACATGATATCCAAATAAGAGGTGTTAATCGAGATGAGAAAAACATACAGATGGCTAAAGAGTTTCCGAATTCTCGACATTTTTTGACCTATCGGCATTCACTAAGGAGTTATGCTTCAATTTTATATCTGAGGCTTCCTACTGCCTTCCGAATTATTCTTCGCGGGGAAGATATTTTGCATCACAACATAGTGAATGATATGATGATGTCTCAGGAAGTGACCTACAAGCCTCAAGCTGGAGTTGATGGGCTTCTTCCCAAGGACTCAAATATGGTTGCTGTTGTTACCATTGGATTTGTGAAGGATGCAGTTCACCATGTTGATGTTTCAGGTTTTAATGTTTATCATAAGAATCGACTCATTAAGCCTTTCTGGAGGATCTGGAATCCAGCTGGAAGTGGAGGACGTGGGGTCATTGGTGTCTTGGAAGCCAATTTTGTTGAACCTGCTCATGATAAACAAGGCTTTGAGCGTACATTAGTTTTATCAAGACTGGAGTCTAAATTGATACAAATGCAGAAAAAATACTGGGCCACTAACTCCCATAAAATTGGTTATTCCAATCGAAATAAAATACAAATAAGAGATTCTGGTGATAAAGACACATCTCCTGCATATGTTCCAGAACCATCAAAATCAAAAAGGAAATATTCTACCATGGATGGCAAGGTAACGCCGTTGACATCAGACAAATTGCATTCACAACCAAATCAGAAACGGATGCAAAAACAAACAGAAAAAGATAGTGCATTTATTAATGGCCGATCTCCTGTTTCTCCTCCTAAACATATAATACAAAGTTCATCCGAAGAATCATCCTCTGATGATGATGTCAGTGAGGATCTCTTGCCTAAAGGAAAAATTCAGAAGGCATCTACCGCTGAGAAATCAAAAGTTCAGAAGGCATCTACCACTGAGAAATCATTTGAAAATGAGAATGGAGACACTACATCAAATAGAAAAGCCTCGCCGTACACACGGGCATCCACATCCAAGATAAAGGGAAAGGATGTAAATAATAGCGACCAACCACTACCTGACAATGATTTACTGACAATTGAGCAATTGAAGAAAGAGAACCGTGAGTTGAAGGAAAGATTACAGAAGAAGGAAGAGGAAATTTTAGAAGTGTCTCAAGCTTTGCAGCATGACAAAGACAAGTGTAAATCTCTCGAAACTCAGCTAAACGAGTCCGAAAAAAAGATTGAAGAGTTGAACCGTGATCAAGAAACTCTCATTGATGTATTCTCTGAAGAGAGGGAAAGACGTGATGCTGAAGAGAAAAATCTAAGAAAGAAGCTTCAGGAGGCATCGAATACTATCCAAGAGCTGCTTGACAAGATACGGGTACTTGAAAAGAAGTCTACAAGTAGCAAACTAGAACGATAA 2457 0.4204 MDVSVKEEVSEAPIITKRKTRTETVTAPPPDSVIELSDSDSDSDSENDVDSENGRSPSTKRRTEGEMVLPVGFLSPLPPEASPPAPLLALPAPEWASNSASRSNHTLGVNSCKQFWKAGDYDGARCGGSDFSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVNVDMLINKKDGSRMLLIEDNGGGMDPEKMRQCMSLGYSVKSKLANTIGQYGNGFKTSTMRLGADVIVFSRFPGKDGTSSTQSIGLLSYTFLRSTGKEDIVVPMLDYERRGQQWNKIIRTTLDDWNKNVETMVQWSPFSDEADLLRQFNLVKDHGTRVIIYNLWEDDQGQLELDFDADPHDIQIRGVNRDEKNIQMAKEFPNSRHFLTYRHSLRSYASILYLRLPTAFRIILRGEDILHHNIVNDMMMSQEVTYKPQAGVDGLLPKDSNMVAVVTIGFVKDAVHHVDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLESKLIQMQKKYWATNSHKIGYSNRNKIQIRDSGDKDTSPAYVPEPSKSKRKYSTMDGKVTPLTSDKLHSQPNQKRMQKQTEKDSAFINGRSPVSPPKHIIQSSSEESSSDDDVSEDLLPKGKIQKASTAEKSKVQKASTTEKSFENENGDTTSNRKASPYTRASTSKIKGKDVNNSDQPLPDNDLLTIEQLKKENRELKERLQKKEEEILEVSQALQHDKDKCKSLETQLNESEKKIEELNRDQETLIDVFSEERERRDAEEKNLRKKLQEASNTIQELLDKIRVLEKKSTSSKLER 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03781 818 MobiDBLite consensus disorder prediction 662 704 - -
Vian1g03781 818 FunFam MORC family CW-type zinc finger protein 4 142 346 - -
Vian1g03781 818 Coils Coil 706 810 - -
Vian1g03781 818 MobiDBLite consensus disorder prediction 544 705 - -
Vian1g03781 818 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 158 342 IPR036890 -
Vian1g03781 818 MobiDBLite consensus disorder prediction 1 18 - -
Vian1g03781 818 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 158 261 - -
Vian1g03781 818 Pfam Morc6 ribosomal protein S5 domain 2-like 388 533 IPR041006 -
Vian1g03781 818 MobiDBLite consensus disorder prediction 48 62 - -
Vian1g03781 818 Gene3D - 143 345 IPR036890 -
Vian1g03781 818 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 60 791 IPR045261 GO:0016887
Vian1g03781 818 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03781 Vian-Chr1 60775164 60805372 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03781 - - gmx:100786679 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03781 1 60775164 60805372 Vian1g03781 1 60775164 60805372 ECH