Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03747 ATGGGTATGTGGAAATTCAGTTTTTTGGGGTTTCTTTGTGCCTATTTTCTCTTTACAATTGGTGCCGTGGAGCTGGGCAGAAACCAACCAACTGAAAGAATCTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTGTATATGAACTTCCAAGTAAGTATAATAAGAAAATTCTTCAAAAAGATCCGAGATGCCTCAACCATATGTTTGCTGCTGAAATCTTTATGCACCGGTTTCTCTTATCTAGCCCTGTCCGTACCCTTAATCCGGAAGAGGCTGACTGGTTTTATACCCCTGTATACACCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTCAAGTCACCACGAATGATGAGAAGTGCCATACAGCTTATTTCTTCAAACTGGCCCTATTGGAATCGCACAGAGGGGGCAGATCACTTCTTTGTGGTTCCTCACGACTTTGGGGCATGTTTTCATTACCAGGAAGAGAAGGCAATTGAAAGAGGGATTCTTCAACTGCTAAGGCGTGCTACATTGGTTCAAACATTTGGACAGAGGAATCATGTATGCTTGAAAGAGGGCTCAATTACCATTCCTCCATACGCTCCACCACAGAAAATGCACACCCACCTAATTCCTGATAAGACTCCCAGGTCCATTTTTGTATACTTCCGAGGACTTTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCCTCTATTTGATGTCTCCACTGAGCATCCGACCACGTACTATGAGGACATGCAACGAGCTGTGTTTTGCCTATGCCCACTTGGATGGGCCCCTTGGAGCCCAAGATTGGTAGAGGCTGTGATATTTGGTTGTATACCTGTTATTATTGCAGATGACATCGTGCTGCCATTTGCTGATGCAATCCCATGGGAAGAGATAGGAGTGTTTGTTGCTGAGGAGGAGGTTCCAAAGTTGGATACCATACTCACATCTATCTCACCAGAAGTCATATTAAGGAAGCAAAGATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCACAGCCTGCTCAACCTGGAGATGCCTTCCATCAAGTTTTAAATGGACTGGCAAGGAAGCTGCCACATGACAACACCGTGTTCTTGAAACCAGGGGAGAAGATCTTGAATTGGACTGCTGGACCTGTGGCTGACCTTAAACCTTGGTAA 1251 0.4492 MGMWKFSFLGFLCAYFLFTIGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILQLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDVSTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEEVPKLDTILTSISPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDNTVFLKPGEKILNWTAGPVADLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03747 416 Pfam Exostosin family 49 344 IPR040911 -
Vian1g03747 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 383 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03747 Vian-Chr1 60325938 60328833 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03747 K20870 - gmx:100812747 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03747 1 60325938 60328833 Vian1g03747 1 60325938 60328833 ECH