Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03746 ATGGCAATGGCTTCAACCACTGCTTCTCCAGTGACAAATTCAAGCTTTTTCACTCCCCAAACATGGTTTCAGAGTAGACCCTTTAGTTTGCACTGTCTGGGAGGAACAATGGAACATAACAGTTATAGGACAAAGATCAAAAGCACTATTCTTCACCATCTCTTCCAGAAGGAGCGACAGAGCCCTTATTATGACAATCTATGTCGTCCTGTTTCAGATTTGCTTCCTTTCATTGCCAATGGGATCAGAGGTGTCACCACCAATCCAGCGATTTTTGAGAGAGCTATTTCATCCTCAAATGCCTACGATGAACAGTTTAGGAAATTGGTAGGGGCAGGAAAAGACACAGAGGGTGCCTATTGGGAATTAGTAGTGAAAGACATACATGATACTTGCAAAATCTTGGAGCCAATTTACAATGATTCAGATGGGGTAGATGGATATGTATCTGTTGCAGTTTCCCCCAAGCTAGCAAATGATACCAAGGGGACAATTGAAGAGGCAAAATGGCTTCATAAGATGATTGGGTGTTCAAATGTTTACATTAAAATTCCTGCAACCGACGAGTCCATTCTTTCTATGAAGGAGGTTATTTCTCTGGGGATAAGTGTGAATGCCACACTCATATTCTGCCTCCCTAGATATGAAGCAGTGATTGATGCTTACTTGGATGGCCTTGAGGCTTGTGGGAGAACTGATCTCTCCAAGGTTTCGAGTGCAGCAGCATTCTACATCAGTAGAGTGGATACTACACTTGACAGAAAACTTGACCAAATTGGTACCTCTGAGGCTCTTGATCTCAAAGGAAAGGGTGCAATTGCTCAAGCAGTCTTAGCTTACCAACTTTATCAGAAAAAGTTTTCTGGTCCAAGATGGGAACACTTGGAGAAGAGAGGTGCCAAGAAGCAGAGGTTAATGTGGGCTTCAACGAATGTGAAAAATCCAGCTTACCCTCACACATTTTATGTTGATTCTCTTATTGGACCGGATACGATTTCAACGATGCCAGAGCAAGCTCTCAAAGCCTTGATGGAGCATGGCATTCTTTCAAGAACTCTTGATGCCAAAGTATCAGAGGCTCAACAAATTTACAATGCAATTCAGAAGTTGGGGATTCATTGGCCTTCTATTGGATCACAACTCGAACGTCAGGTGCTGGATTCCTTCACAAAAAGCTTTGATAATGTGCTCAATTGCATTCACAACAAAACACTTGTACAAGTCTGA 1227 0.423 MAMASTTASPVTNSSFFTPQTWFQSRPFSLHCLGGTMEHNSYRTKIKSTILHHLFQKERQSPYYDNLCRPVSDLLPFIANGIRGVTTNPAIFERAISSSNAYDEQFRKLVGAGKDTEGAYWELVVKDIHDTCKILEPIYNDSDGVDGYVSVAVSPKLANDTKGTIEEAKWLHKMIGCSNVYIKIPATDESILSMKEVISLGISVNATLIFCLPRYEAVIDAYLDGLEACGRTDLSKVSSAAAFYISRVDTTLDRKLDQIGTSEALDLKGKGAIAQAVLAYQLYQKKFSGPRWEHLEKRGAKKQRLMWASTNVKNPAYPHTFYVDSLIGPDTISTMPEQALKALMEHGILSRTLDAKVSEAQQIYNAIQKLGIHWPSIGSQLERQVLDSFTKSFDNVLNCIHNKTLVQV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03746 408 PIRSF Trnald_Bac_Plnt 40 407 IPR004732 GO:0004801|GO:0005737|GO:0006098
Vian1g03746 408 CDD Transaldolase_like 61 394 IPR004732 GO:0004801|GO:0005737|GO:0006098
Vian1g03746 408 SUPERFAMILY Aldolase 61 403 - -
Vian1g03746 408 Hamap Transaldolase [tal]. 60 408 IPR004732 GO:0004801|GO:0005737|GO:0006098
Vian1g03746 408 PANTHER TRANSALDOLASE 67 403 IPR001585 GO:0005975
Vian1g03746 408 ProSitePatterns Transaldolase signature 1. 84 92 IPR018225 GO:0005975
Vian1g03746 408 NCBIfam transaldolase 74 398 IPR004732 GO:0004801|GO:0005737|GO:0006098
Vian1g03746 408 Gene3D Aldolase class I 50 404 IPR013785 -
Vian1g03746 408 Pfam Transaldolase/Fructose-6-phosphate aldolase 79 398 IPR001585 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03746 Vian-Chr1 60320678 60323245 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03746 K00616 - gmx:100811673 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03746 1 60320678 60323245 Vian1g03746 1 60320678 60323245 ECH