Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03733 ATGGGAGGAGCTTCTGCAGATCTTCAGAATCGTGAATCAGACATAGAGCTAACTGATGCTGAAAGGTATGACACAAACACCAACAACTTAGGGGCTTCAGAGTCAAAAGCTGGCACTGATGTTGACCTTGACAGTGGCAGAAAATCTCAGGCTGATGGTGAAGGACGCTATGTTGAGGTCACCATGGACATTCATGGTGATTCTGTGGCCTTACACAGTGTTAAAGATTTTGGAGGTGTTGATGGGGTGGAAGAGGAAGACGGTGAGAAGTTGGGTTTGACAGGGAAGAGGCTTGAGAAGAAAAAATCCTTTGGGGCCTCTGTGGTTCAGAGTGCTGCTATCCGCATGAAGCAGCTGAAGCGTTTGGCTTCTTTCTCAAAACCAGCACCAAAACACTTTGAAAGAACAAAGTCTGCAGTGGCTCATGCTCTCACAGGGCTCAAGTTTATCAGCATGGCCGATGGGGGTGCAGGGTGGGTTGAGGTGGAGAAGCGGTTTGAGAAGCTCACTGCTAACTCTGATGGCTATCTTCCTCGTGCTCTCTTTGCACAATGCTTAGGATTGAACAAGGAATCCGAGGCTTATGCGGAGAAGCTTTTTGATACTCTTGCTAGGCAGAGAGGTATTCAAGGGGGTTCCATTAACAAGATCCAGTTGAGGGAGTTCTGGGACAATATTTCTGACCAGAGCTTTGATACTAGGCTCAAAACATTCTTTGACATGGTTGATAAAGATGCGGATGGAAGAATCACCGAGGAAGAAATTAAAGAGATTATCTGCCTTAGCGCCACTGCCAACAAACTGTCAAACATTCAGAAGCAAGCAGAGGAATATGCAGCTTTGATCATGGAAGAACTGGACCCTGATGACTCAGGATACATCATGATAGACAACTTGGAAACACTTCTGTTGCATGGACCAGAGGAAACTACAAGAGGAGAAAGCAAGAATCTGAGTCAAATGCTAAGCCAAAAGCTTAAGCCTACATACGTGGACAGTGTAATATTGAGGTGGTACAGGGATGCCAAGTACTTTGTGCTGGACAATTGGCGAAGATCTTGGGTACTTGCCCTGTGGATTGGTGTGATGTTAGGCCTATTTGCCTATAAATTTGTGCAGTATCGGAGAAGAGCTGTCTATGAGGTAATGGGCCATTGTGTATGCATGGCAAAAGGTGCAGCAGAGACACTTAAATTGAACATGGCTCTCATCTTGTTACCTGTTTGCCGAAACACCATCACCTGGCTAAGGAATAAGACCAAACTGGGTGCTGTAGTTCCTTTTGACGACAACATCAACTTCCACAAGGTAATAGCTGTGGCAATAGCCATTGGTGTTGGTGTACATGCCATCTATCATCTTACTTGTGATTTTCCTCGCCTTCTTCATGCAAGTGATGAGAAGTACAAGCTGATGGAACCCTTTTTCGGAGACAGACCATCAGATTATTGGTATTTTGTCAAATCATGGGAAGGAGTAACAGGGATTATAATGATTGTGCTAATGGCAATAGCTTTTACATTGGCCAATCCTGCATTCAGGAGAGGCAGAACAAAACTACCCAAACCCTTCAACAAACTCACAGGTTTCAATGCCTTTTGGTATTCTCATCATCTCTTCGTTTTTGTCTATGCCCTGTTGGTTGTGCATGGAATCAAACTTTACTTGACCCATAAATGGTACAAGAAAACGACATGGATGTATCTAGCGGTTCCCATTACCATTTATGCATTAGAAAGACTGATTAGAGCACTCAGATCAAGCATCAAGTCTGTCAAAATATTGAAGGTGACTCTTTATCCTGGAAACGTGTTAGCACTTCAAATGTCAAAGCCACAGGGATTTACCTACAAAAGTGGACAATACATGTTTGTCAATTGTGCTGCCGTGTCTCCATTTGAATGGCATCCATTTTCCATAACTTCAGCCCCTGATGATGATTACCTTAGCGTTCACATAAAAATACTTGGTGATTGGACCCGAAGTCTGAAAACCAAATTCTCACAGGCATGCCAACAACCCCTCAATGGGCAGAGTGGACTTCTAAGAGCAGAATGCTTGAAAGGAGATAGCAGTTCAATAAATTTCCCGAAAGTTCTGGTGGATGGACCATACGGGGCTCCGGCACAGGACTACAGGGAGTACGAGGTGGTTCTGCTGGTGGGGCTAGGAATAGGGGCTACCCCAATGATAAGCATTCTGAAGGACATGGTGAAGAGGTTGAAGGGGATAGAGGAGGAGGAAGTGGAGGAGGGAGCGGTGGCGAAGAATGGCGACGATGAGTTCAAGACAAGGAGAGCATACTTCTACTGGGTGACGAGAGAGCAGGGTTCCTTCGACTGGTTCAAAGGGGTGATGAACGAGGTAGCGGAAGAAGATCGAAGGAAGGTCATAGAGCTCCACAGCTACTGCACCAGCGTCTACGAAGAAGGTGATGCTCGCTCTGCTCTCATTGCGATGTTGCAGTCCATCAACCATGCAAAGAATGGCCTTGACATTGTCTCTGGAACTCGCGTCATGTCTCACTTTGCCAAACCCAATTGGCGCACAGTTTACAAACGCATAGCCCTTAATCATCCACATGCTCGTGTTGGGGTGTTTTACTGTGGGCCATCAGCTCTCACCCATGAGCTTCGTCAGCTGGCGTTGGATTTCTCTCACAACACATCCACCAAGTACGATTTCCACAAAGAAAATTTCTGA 2703 0.4565 MGGASADLQNRESDIELTDAERYDTNTNNLGASESKAGTDVDLDSGRKSQADGEGRYVEVTMDIHGDSVALHSVKDFGGVDGVEEEDGEKLGLTGKRLEKKKSFGASVVQSAAIRMKQLKRLASFSKPAPKHFERTKSAVAHALTGLKFISMADGGAGWVEVEKRFEKLTANSDGYLPRALFAQCLGLNKESEAYAEKLFDTLARQRGIQGGSINKIQLREFWDNISDQSFDTRLKTFFDMVDKDADGRITEEEIKEIICLSATANKLSNIQKQAEEYAALIMEELDPDDSGYIMIDNLETLLLHGPEETTRGESKNLSQMLSQKLKPTYVDSVILRWYRDAKYFVLDNWRRSWVLALWIGVMLGLFAYKFVQYRRRAVYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWLRNKTKLGAVVPFDDNINFHKVIAVAIAIGVGVHAIYHLTCDFPRLLHASDEKYKLMEPFFGDRPSDYWYFVKSWEGVTGIIMIVLMAIAFTLANPAFRRGRTKLPKPFNKLTGFNAFWYSHHLFVFVYALLVVHGIKLYLTHKWYKKTTWMYLAVPITIYALERLIRALRSSIKSVKILKVTLYPGNVLALQMSKPQGFTYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIKILGDWTRSLKTKFSQACQQPLNGQSGLLRAECLKGDSSSINFPKVLVDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDMVKRLKGIEEEEVEEGAVAKNGDDEFKTRRAYFYWVTREQGSFDWFKGVMNEVAEEDRRKVIELHSYCTSVYEEGDARSALIAMLQSINHAKNGLDIVSGTRVMSHFAKPNWRTVYKRIALNHPHARVGVFYCGPSALTHELRQLALDFSHNTSTKYDFHKENF 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03733 900 Gene3D - 133 251 - -
Vian1g03733 900 CDD NOX_Duox_like_FAD_NADP 594 900 - -
Vian1g03733 900 SUPERFAMILY EF-hand 160 307 IPR011992 -
Vian1g03733 900 Gene3D - 706 900 IPR039261 -
Vian1g03733 900 Pfam FAD-binding domain 590 708 IPR013112 GO:0016491
Vian1g03733 900 MobiDBLite consensus disorder prediction 1 54 - -
Vian1g03733 900 SFLD NADPH oxidase subgroup (NOX) 137 900 - -
Vian1g03733 900 FunFam Respiratory burst oxidase homolog A 578 670 - -
Vian1g03733 900 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 582 711 IPR017927 GO:0016491
Vian1g03733 900 PANTHER NADPH OXIDASE 195 900 - -
Vian1g03733 900 Pfam Ferric reductase like transmembrane component 392 548 IPR013130 -
Vian1g03733 900 FunFam Respiratory burst oxidase homolog A 133 251 - -
Vian1g03733 900 ProSitePatterns EF-hand calcium-binding domain. 243 255 IPR018247 -
Vian1g03733 900 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 713 900 IPR039261 -
Vian1g03733 900 Gene3D Translation factors 578 679 - -
Vian1g03733 900 ProSiteProfiles EF-hand calcium-binding domain profile. 230 265 IPR002048 GO:0005509
Vian1g03733 900 SFLD Ferric reductase subgroup (FRE) 337 900 - -
Vian1g03733 900 PRINTS Cytochrome B-245 heavy chain signature 530 550 IPR000778 GO:0016020|GO:0016491
Vian1g03733 900 PRINTS Cytochrome B-245 heavy chain signature 438 456 IPR000778 GO:0016020|GO:0016491
Vian1g03733 900 PRINTS Cytochrome B-245 heavy chain signature 697 710 IPR000778 GO:0016020|GO:0016491
Vian1g03733 900 PRINTS Cytochrome B-245 heavy chain signature 720 737 IPR000778 GO:0016020|GO:0016491
Vian1g03733 900 Pfam Ferric reductase NAD binding domain 715 882 IPR013121 GO:0016491
Vian1g03733 900 FunFam Respiratory burst oxidase protein A 706 900 - -
Vian1g03733 900 MobiDBLite consensus disorder prediction 40 54 - -
Vian1g03733 900 SUPERFAMILY Riboflavin synthase domain-like 591 707 IPR017938 -
Vian1g03733 900 Pfam Respiratory burst NADPH oxidase 133 233 IPR013623 GO:0004601|GO:0050664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03733 Vian-Chr1 60225232 60230024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03733 45 900 Miscellaneous Gene Families AT5G51060 64.261 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03733 K13447 - gmx:100808271 1581.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03733 1 60225232 60230024 Vian1g03733 1 60225232 60230024 ECH