Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03668 ATGCGCATAATTCACTTCAGTTATGGTTTCAGAGATTCCTTATTTTGGTTCCTAACTCAAAAAACAACTATGGCGGGTGCATGCAGCAGAGCACCCATTTCCCATCTTCCTCTGCGGAACCCCAAAACCAGAATCTATAATTCTCAGAGCAGAGTTCTTCAACATCCAAATAGGCGTTTGTTCCTCTTCTCTCTGCCCCTGTCTAGTTTCGTTCTCCTTCCCGTTCCCAGCTTTGGTGATGGTAACGGTGCAATTGATAAATTTCAACATGGGTCTTCTTCCTCATACGCTGCCACAATGTATGACCCTCTAAGTGCTGCTGAAAGAGAAGCAAGTGCTTTAGTTTCACAGAGAGTCTCTCAAGCAGTGGATTTGTTGGAGAAAGGGAGGGAATTGCAGGCTCAGGGAGACTTTGCTGCTGCTCTTGGTTACTTTTCTCAGGTTGTTGAAAGCTACAAAGACTTGGCATTCTCAGAGTATGCAAGGGTAGGAAGGGCATTGGCCCTGTATGAAGTTGGTGACAGAGAAGAAGCAATTGCAGAGATGGAGGACGTTTCAATATCCCTAAAAGGATATCCAGAAATACATGCAGCTCTTGCGGCAGCCTTATATGCAGATAAACACGCCGCATTGCTTGCTGAAAACCAGTTTGCCATTGCAACTCTTCTTGATCCCCATTTTACAGACATTTCATATGTTAGAGACACAAAGCACTGGCCTCCAAGTTTGATCAGTTCTCTGCAGAACTTCATCACACTGTCTTAA 765 0.4458 MRIIHFSYGFRDSLFWFLTQKTTMAGACSRAPISHLPLRNPKTRIYNSQSRVLQHPNRRLFLFSLPLSSFVLLPVPSFGDGNGAIDKFQHGSSSSYAATMYDPLSAAEREASALVSQRVSQAVDLLEKGRELQAQGDFAAALGYFSQVVESYKDLAFSEYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEIHAALAAALYADKHAALLAENQFAIATLLDPHFTDISYVRDTKHWPPSLISSLQNFITLS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03668 254 Pfam Tetratricopeptide repeat 134 201 - -
Vian1g03668 254 PANTHER EXPRESSED PROTEIN 36 254 - -
Vian1g03668 254 SUPERFAMILY TPR-like 116 230 IPR011990 GO:0005515
Vian1g03668 254 Gene3D Tetratricopeptide repeat domain 115 245 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03668 - - var:108334734 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03668 1 59479667 59482347 Vian1g03668 1 59479667 59482347 ECH