Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03660 ATGGTGAGGTTTTTAGGTTTGACTCTTGGTTACACAGAAGAACCCCGAGAAATAGCATCAAGATCGAATCTGACCAGTGAGTCTGGTGAAAATGGGTGGCTCATCAGGTTCTTTGACTCGGCGTTCTTTTGTGAGTGGATTGCTGTTAGCTACTTGTATAAGCATGATCACGCGGGGGTGCGTGATTATCTCTGCAATAGAATGTATACACTTCCGTTGCAAGGTGTTGAGAGTTATTTGTTCCAGATATGTTACATGATGATACACAAGCCTAGTCCATCCTTGGATAAATATGTGATAGATGTGTGCTCGAAGTCGCTTAAAATTGCTTTGAAGGTACATTGGTTCTTGTTGGCAGAGCTTGAGGACTCTGATGATAATGAAGGGATTAGTAGGATTCAGGAGAAGTGTCAGGTTGCTGCCACCTTGATGGGTGAGTGGCCACCTCTAATTAGGCCTCAAACTGAACCTCCAAGTCCTGGAGGGAAGAGCCAAGTTTTGAATAGGTTACTGTCATCAAAAAATCGCTTGTTGTCACTAACGTCCTCACCACCTGGTCAGAAATCTTTATCATTTTCACCTTCCTCAGGAAACAGTTTGCAAGAGGATGGGAAACCAGTGTCTCCTGACGAGAACAAGATATTTAAGAAGTTTATGCCAGGCCCTAAAGTTAGAGATGCGTTTCTTTTTAGGAAGTCAGTGGACAAAGAGGATGATGGTTCTGAAAAGGATGGTTTTTTCAAGAGGCTTTTGAGAGATAGCAAAGGTGATGATGAACTGGGCCAAAAAATTCGTGATGCATTTCTGTTTAGGAAGTCATCTGTGAAAGATGATGAAGAGTCTGAAAAAGATAATTTCTTTAAAAGGTTCTTAAGGGACAGTAGAGGTGATGATGAAGACTCAGAAAAGGATGGTTTCTTCCGAAGACTCTTGAGGGACAGTAGAAGTGAAGAAGAAGATGTAGCTTCAAGTTCAGATGGACTATTCAAGAGGTTGTTTCGTGATAGCAAGAATGATTCTGAGGACAGAGCACACACTAAAACAATAGAATATGAAGATAAAGAGGGGTTTTTTCGAAAGTTGTTCCGAGAGAAATCAGAAGATAGGAAGGACGGGAGTGATAGGAATGATACTAGAGAAGCTACTAATGCTGACGAGAAATATGCCAAACTTGCTGAAGAGGATGAAAAAGAAGGGTTTTTCCGGAAATTATTAAAGGATAAATTCGAGGACAAGAAGGATACAAATGATAAGATTGAAGAGGGTACTCCCAGTGTCGAGGAAGAAGAGTCTTCTGAGTTTTCCTTGTTCAAAAGATTATTTCGTGTGCACCCAGAAGATGCTAAAAGTAGTATGGCCAATGCTAACATCAATAGTGGTGGTTTAGTTGAAAGTAGTCCAGGTACTGATAATTTTTTTCGTAAGTTGTTCAGAGATCGTGACCGTTCAATTGAAGATTCAGAGCTATTGGGTCCAAAAAGACAGAAAGAGAAGAAACCTGGATCCCCAACGCAGCAAAGTGAAAAATCAAGTGCAAAGCCACCATTACCAATTAGTCCATCTCAGTTTCGGAAAGGGGCATACCATGACTCATTGGAGTTTGTGCAGTCATTATGTGATACGTCGTATGGGTTAGTGGATATATTTCCACTTGAAGATCGCAAGAGTGCTCTTCGTGAGGCACTTGTAGAAATCAATCTACATGTAGTGAAGGTTCAGAACACTGGAGGTGTTTGTTTTCCATTGGGAAAGGGCATGTATCGTGTGCTTAATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCACCTTTCCTGATCTGTGTAGAGGTTTTGAGATGTGAAATGCCAAGTAACTCTAAGGAGGCATCCAGTTCTCAAAAACTTTCTCAAGGGGGAATTCCTTTGGCAAATGGAGATGCGCTCTTGCAAAGACCACCCCCCTGGGCTTATCCATTACGGACAGCACAAGAGGTTTATCGCAATAGCAATGATAGGATGTCCAGTTCAACTGCTCACGCAATTGACCAGGCAATGACTCATGTATCTGAGGCAAAAATCAAATTTGTTAGTGTGAATATTTCCACAGAAACACAGTTAAATGGTCAGCCAGAGAAAATTGAAGTGGTTGATCTACATGGTGGCAATCAGCATTCTGCTTCAATTCATACAAATGGTGTGTATGACGAGGCTGCAGCAGGACTTGGCAGTAATTTGGAATGGGTACGTGTAGTGTTGACTGCTGATCCTGGGGTTAGATTGGAAGATATTGAGGAGCAAGCACCTCCCCGGAGGAAAGAACATCGCCGTGTTCCAAGTACGGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAAGGGGAAGCACCTCTTGGACTTCCTTTGAAAGGTGCTGGTCAAGATTCATCTGATGCACAACCAAGGGCTAATGGAATCACTCCCAAAGCCAGCGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAGGATAGGATATGCAAGGCTTCCATATATGCGAAGTTACCTGGTTGGGACTTGCGATCTGTTATTGTTAAGAGTGGTGATGATTGCAGGCAGGAGCATCTGGCTGTTCAACTTATTTCTCACTTCTATGATATTTTCCAAGAAGCTGGTCTACCCCTCTGGCTGCGACCATATGAAGTTCTGTGTACGTCTTCTTACACAGCTATTATTGAAACAATTCCAGATACGGCTTCTCTACACTCTATCAAAAGTAGATATCCCAACATCTCAAGCTTACGTGAATTCTTCAGTGCTAAGTATCAAGAAAATTCTCCCAGTTTTAAACTTGCCCAGAGAAACTTTGTTGAAAGTATGGCAGGATATTCCCTGGTGTGCTACTTTCTGCAGGTGAAGGATAGACATAATGGGAACCTCCTATTGGATGAAGAAGGTCATATCATACATATTGATTTTGGCTTCATGCTCTCCAATTCACCTGGTGGTGTTAACTTTGAAAGTGCACCTTTCAAACTAACTCGGGAACTTCTTGAGGTTATGGATTCTGATGCTGAGGGTGTTCCAAGTGAATTCTTTGATTACTTTAAGGTTTTATGCATTCAAGGCTTCCTTACTTGCCGCAAGCATGCAGAGCGCATCATTCTTCTTGTTGAGATGTTGCAGGATTCTGGTTTCCCATGTTTTAAAGGTGGTGCCCGGACAATACAGAACCTACGAAAGCGATTCCATCTCGGTTTAACTGAAGAGCAATGTGTCTCCTTGGTGCTGTCACTCATCAGCAGTAGCCTGGATGCTTGGAGGACCCGGCAGTATGATTATTATCAGAGGGTTTTGAATGGAATATTATGA 3339 0.4244 MVRFLGLTLGYTEEPREIASRSNLTSESGENGWLIRFFDSAFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGVESYLFQICYMMIHKPSPSLDKYVIDVCSKSLKIALKVHWFLLAELEDSDDNEGISRIQEKCQVAATLMGEWPPLIRPQTEPPSPGGKSQVLNRLLSSKNRLLSLTSSPPGQKSLSFSPSSGNSLQEDGKPVSPDENKIFKKFMPGPKVRDAFLFRKSVDKEDDGSEKDGFFKRLLRDSKGDDELGQKIRDAFLFRKSSVKDDEESEKDNFFKRFLRDSRGDDEDSEKDGFFRRLLRDSRSEEEDVASSSDGLFKRLFRDSKNDSEDRAHTKTIEYEDKEGFFRKLFREKSEDRKDGSDRNDTREATNADEKYAKLAEEDEKEGFFRKLLKDKFEDKKDTNDKIEEGTPSVEEEESSEFSLFKRLFRVHPEDAKSSMANANINSGGLVESSPGTDNFFRKLFRDRDRSIEDSELLGPKRQKEKKPGSPTQQSEKSSAKPPLPISPSQFRKGAYHDSLEFVQSLCDTSYGLVDIFPLEDRKSALREALVEINLHVVKVQNTGGVCFPLGKGMYRVLNIPEDEAVLLNSREKAPFLICVEVLRCEMPSNSKEASSSQKLSQGGIPLANGDALLQRPPPWAYPLRTAQEVYRNSNDRMSSSTAHAIDQAMTHVSEAKIKFVSVNISTETQLNGQPEKIEVVDLHGGNQHSASIHTNGVYDEAAAGLGSNLEWVRVVLTADPGVRLEDIEEQAPPRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGITPKASDALSGELWEAKKDRICKASIYAKLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTAIIETIPDTASLHSIKSRYPNISSLREFFSAKYQENSPSFKLAQRNFVESMAGYSLVCYFLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGVPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGARTIQNLRKRFHLGLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03660 1112 MobiDBLite consensus disorder prediction 484 503 - -
Vian1g03660 1112 MobiDBLite consensus disorder prediction 484 520 - -
Vian1g03660 1112 MobiDBLite consensus disorder prediction 794 816 - -
Vian1g03660 1112 SUPERFAMILY Protein kinase-like (PK-like) 572 1105 IPR011009 -
Vian1g03660 1112 MobiDBLite consensus disorder prediction 366 389 - -
Vian1g03660 1112 MobiDBLite consensus disorder prediction 178 205 - -
Vian1g03660 1112 Pfam Phosphatidylinositol 3- and 4-kinase 851 1058 IPR000403 -
Vian1g03660 1112 SMART pi3k_hr1_6 851 1110 IPR000403 -
Vian1g03660 1112 FunFam phosphatidylinositol 4-kinase beta 1 745 904 - -
Vian1g03660 1112 MobiDBLite consensus disorder prediction 412 431 - -
Vian1g03660 1112 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Vian1g03660 1112 MobiDBLite consensus disorder prediction 178 212 - -
Vian1g03660 1112 CDD PI4Kc_III_beta 820 1112 - -
Vian1g03660 1112 FunFam Phosphatidylinositol 4-kinase beta 1 909 1110 - -
Vian1g03660 1112 Gene3D - 747 904 - -
Vian1g03660 1112 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 829 1097 IPR000403 -
Vian1g03660 1112 Gene3D - 909 1110 IPR036940 -
Vian1g03660 1112 PANTHER PHOSPHATIDYLINOSITOL KINASE 44 662 IPR015433 GO:0046854|GO:0048015
Vian1g03660 1112 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 854 868 IPR018936 GO:0016301
Vian1g03660 1112 SUPERFAMILY ARM repeat 54 126 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03660 Vian-Chr1 59397631 59412585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03660 1 1111 Lipid Metabolism Gene Families AT5G09350 68.860 0.0 1542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03660 K19801 - gmx:100784942 1993.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03660 1 59397631 59412585 Vian1g03660 1 59397631 59412585 ECH