Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03659 ATGCTGAGTTACATCAACAACATCATTCGCTGTTATTTTCAGTTCTTCTACCTAATGCGGGAGGAGCACCCCTTATTAGCAGAGAAACCTGTGTTAGTCCAACCATGCTTGGATCAAAGCCATGGCCAGGACAAAACCAACACCGAGGTTGGAGTGTTATCCAAAACAACCACATCGGAAAAATCTCATGACTTTTGCAACCACTCTGAGTCCTTCCAGACGCTTGTGGAGATGGGTCTGCCGTGTAATGAATCAGTGGTGGAAAAACTGCGTTGGTTGCGGTCCCAAATCATTGGTTGCCATGCAGAGTTTGATTCCCCGTTTGGAAAAAGAAAAGTTCTCTATGCTGACCACACTGCTTCGGGCCGCAGCCTTCACTATAATGAAAATTTCATCATCAGTCACGTTCTTCCGTTCTATGGTAACACGCACACATGCGACAGTTACGTTGGAAGCAGGACAACAAAAATGGTACACGAAGCAAGTGAGTACATTAAGAAATGTTTAGGTGGTGGGGAAGATGATGCACTTATATTATGTGGTTCGGGCACAACTGCAGCTATCAAGAGGCTGCAAGAAGTGATGGGGATCACTGTGCCATCTGTTATGAGGGAAAGGGTTTTGAAGAGTCTGAACACAGAAGAAAGATGGGTGGTTTTTGTCGGACCGCATGAGCACCATTCAAACCTTCTTTCTTGGAGGCAAAGTTTGGCTGAGGTGGTAGAGATTGATCTTGATGACGAAGGATTGCTTGACATGGATGCTCTAAGGATACAAATTGAGGCCTACAAAGATACCAACCGGCCCATGTTGGGATCTTTTTCAGCTTGTAGCAATGTCACGGGAATCTACCTAGATACACGTGCAGTTGCTCAGCTTCTTCATCAGTACAAAGCCTTTGCATGCTTTGATTTTGCAGCAAGTGGTCCATACGTGGAGATTGACATGAGGTCTGGGGAAAGTGATGGGTATGATGCAGTGTTCCTAAGTCCACACAAGTTTCTAGGTGGTCCTGACTCTCCTGGGGTTCTCCTCATGAACAAGGCCCTTTATCTGCTAGGATCTTCACCACCGTCAACTTGTGGAGGTGGAACTGTGACTTATGTCAATGGCTTCAACGAACAGGAAACATTATACCTGGAGAACATAGAGGAAAGGGAAAGTGGGGGCACGCCTCCAATAATCCAGACAGTGAGAGCAGCATTGGCATTTTGGGTGAAAGAATACATAAGCTGTGAAGAGATTGAAAAAAGTGAACAAATGTACATCAACAAGGCACTAAAGAGGCTTGGCTCAAACCCCAACATTGAGGTTCTAGGAAACTTGAAGGCCAAGAGACAAGCTATATTGTCGTTTCTGATTTACTCCACCATCAATTGTTCCTTAGCAGGTGAATGGAGTGATGAAGGGGAACTTGATCTGTGGGCAGAAACAGGGAACCAAAGAGGGAAACCACTTCATGGCCCTTTCGTTGCAGCATTGCTCAATGACCTCTTTGGAATCCAAGCTCGTGGAGGGTGTGCTTGTGCTGGACCTTATGGCCACGAATTGCTCCACATCAACAGGTCACAGTCACTTGCCATTAGATCAGCAGTTGAAAAGGGTTACATTGGAGTAAAACCAGGGTGGAGTAGAGTTAGTTTTCCCTACTACATGAGTGAAGAGGATTTTGAATACATTCTGAAAGCCATAGAATTTTTAGCTGTGTATGGCCAACGGTTCTTTCCCCTTTATAGCTTTAATTTGATAAATGGGAGCTGGAGATTGAAGACAGAGAAAATTGAGGCACTAACCATTGAAGGAAACTGCAACTTTGGTGGGGTGATGAGAAGGAACGAATCAAACTTTGAGGTAGCTAAATGCATTGCTACTCGCCTTCCAAAATTCCCATCTCCGGGAATAATTAAGGAGGAACTCCATCCAGATATCTTCTGCTTCAAAGTTTAA 1947 0.4479 MLSYINNIIRCYFQFFYLMREEHPLLAEKPVLVQPCLDQSHGQDKTNTEVGVLSKTTTSEKSHDFCNHSESFQTLVEMGLPCNESVVEKLRWLRSQIIGCHAEFDSPFGKRKVLYADHTASGRSLHYNENFIISHVLPFYGNTHTCDSYVGSRTTKMVHEASEYIKKCLGGGEDDALILCGSGTTAAIKRLQEVMGITVPSVMRERVLKSLNTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIDLDDEGLLDMDALRIQIEAYKDTNRPMLGSFSACSNVTGIYLDTRAVAQLLHQYKAFACFDFAASGPYVEIDMRSGESDGYDAVFLSPHKFLGGPDSPGVLLMNKALYLLGSSPPSTCGGGTVTYVNGFNEQETLYLENIEERESGGTPPIIQTVRAALAFWVKEYISCEEIEKSEQMYINKALKRLGSNPNIEVLGNLKAKRQAILSFLIYSTINCSLAGEWSDEGELDLWAETGNQRGKPLHGPFVAALLNDLFGIQARGGCACAGPYGHELLHINRSQSLAIRSAVEKGYIGVKPGWSRVSFPYYMSEEDFEYILKAIEFLAVYGQRFFPLYSFNLINGSWRLKTEKIEALTIEGNCNFGGVMRRNESNFEVAKCIATRLPKFPSPGIIKEELHPDIFCFKV 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03659 648 PANTHER CYSTEINE DESULFURASE 84 573 - -
Vian1g03659 648 SUPERFAMILY PLP-dependent transferases 106 565 IPR015424 -
Vian1g03659 648 Gene3D Aspartate Aminotransferase, domain 1 388 570 IPR015422 GO:0003824
Vian1g03659 648 Gene3D - 132 358 IPR015421 GO:0003824
Vian1g03659 648 Pfam Aminotransferase class-V 139 489 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03659 Vian-Chr1 59388161 59391501 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03659 - - gmx:100778947 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03659 1 59388161 59391501 Vian1g03659 1 59388161 59391501 ECH