Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03658 ATGCATCTGGAGATGATCCAAGCTGCATCTCTTCTTGCATATCGTTGCATACGTAAACCACGTCACATTGTTAAATCAGAGAAACGCAAAGATACTCAGGTAAGTGTTTCAACCAAAGAAGAAACAAGGTTTCATCATGAATGTTGCAAGCACTCAGAGTCCGAATCGGAATCGTCCTTTGAGAAGGTGGTGGAGATGGGAGCGCCGTGTAACGAATGCGTTCAAGAAAAACTGCGATGGTTAAGGTCTCAGATCATCGGTAACGGTGCAGAGTTCGATTCTCCGTTTGGAAGACGAATCCTTGTGTATGCTGATCACACCGCTTCCGCTCGCAGTCTTCGCTACAATGAAAACTTCATCGCCGATCATCTTCTTCCTTTCTACGGCAACACTCACACGTCAGACAGTTACGTGGGAAGCAGGACAACAAAGATGGTACACGAAGCAAGAGAGTACATTAAAAAATGCTTAGGTGGTCGGAAAGACGATGCACTCATCTTGTGTGGTTCTGGCTCAACTGCAGCCATCAAGAGGCTGCAAGAAGTGATGGGAATTGCAGTACCCTCTATCTTGAGGGAAAGGGTTTTGAAGAGCCTTAGCACAGAAGAAAGATGGGTGGTTTTTGTTGGACCTCATGAACACCATTCCAACCTCCTTTCTTGGAGGCAAAGTTTGGCTGAGGTGGTAGAAATTGGTCTTGATCACCAGGGCTTGATAAACATGGATGCTCTAAAGCTAAAACTTGAGGCCTACAAAGACACCAATCGACCCATGTTGGGATCTTTCTCAGCCTGTAGCAATGTCACGGGAATCTACTCAGATACACGAGCAATTGCTCAGCTTCTTCATCAATACAAAGCCTTTGCATCCTTTGATTTTGCAGCGAGTGGTCCATACGTGGAGATAAAGATGAGGTGTGGGGAGAGTGATGGGTATGACGCAGTGTTCCTGAGTCCACACAAGTTTCTTGGTGGTCCTGACTCTCCTGGGATTCTGCTTATGAACGATGCTCTCTACCGATTAAGATCTTCGCCGCCATCAACTTGTGGAGGTGGAACTGTGGATTACGTCAACGGCTTCAACAAAAAGGATACACTGTACTTGGAGAACATAGAGGAAAGAGAAAATGGGGGCACCCCTCCTATAATCCAGACAGTGAGAGCAGCATTGGCATTTTGGGTGAAAGAGTACATAACCTACAAAGAGATTGAGAAACGTGAACGAGTTTACATTAAGAAAGCACTTAAGAGACTAATGTCCAACCCAAACATTGAGGTTCTTGGAAACTTGAGAACCAAAAGACAAGCCATATTGTCATTTATCATTTATTCTACCACGAACAAAAGCTCTTTATCACCTGGTTGGGGCATTAAATGGCTAGAAGACAGCCAGAAACAGGAAAAACAAAGAGAACTTAACTTTTGGAAAGAGACAGAGAGCGAAAGAGGTAAGCTACTTCATGGCCCTTTTGTTGCAACACTGCTAAGTGACCTATTTGGCATCCAAGCCCGTGGAGGGTGTGCTTGTGCTGGACCTTATGGCCACCAATTGCTCAATATCAACAAAGCTCAATCTCTTGCCGTTAGATCAGCAATTCAAGAGGGTTATGTTGGAGTAAAACCTGGGTGGAGCAGAGTCAGTTTTCCGTATTACATGGAGGAGGAGGAATTTGAGTTCATTTTAACTGCGATAGAGTTTGTAGCAAACTATGGCCAACGATTCCTTCCCTTGTATAGCTTCAATTTGAGAAATGGCAGTTGGAGAATGAAGAAAGAGCAACTTCAGGCTGTGATAAACCAAAACAACTGCAACTTTCGGAAAACTCTTGAGGAAGCAAATGATTTGAAACCACTAAAAGCAGGGAATAACGTTGGAACCAAACAAGTTAGGGTGTTGAGGAAATCATACTTAGATACAGCAAAATATATTGCAAGTCTTCTCCCTAAGTTCCCTTCTGAGGCCATACTCCATGAAGATGTAGATCCCGATGTTCTGTATTTTAGAGTTTAA 2010 0.4388 MHLEMIQAASLLAYRCIRKPRHIVKSEKRKDTQVSVSTKEETRFHHECCKHSESESESSFEKVVEMGAPCNECVQEKLRWLRSQIIGNGAEFDSPFGRRILVYADHTASARSLRYNENFIADHLLPFYGNTHTSDSYVGSRTTKMVHEAREYIKKCLGGRKDDALILCGSGSTAAIKRLQEVMGIAVPSILRERVLKSLSTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDHQGLINMDALKLKLEAYKDTNRPMLGSFSACSNVTGIYSDTRAIAQLLHQYKAFASFDFAASGPYVEIKMRCGESDGYDAVFLSPHKFLGGPDSPGILLMNDALYRLRSSPPSTCGGGTVDYVNGFNKKDTLYLENIEERENGGTPPIIQTVRAALAFWVKEYITYKEIEKRERVYIKKALKRLMSNPNIEVLGNLRTKRQAILSFIIYSTTNKSSLSPGWGIKWLEDSQKQEKQRELNFWKETESERGKLLHGPFVATLLSDLFGIQARGGCACAGPYGHQLLNINKAQSLAVRSAIQEGYVGVKPGWSRVSFPYYMEEEEFEFILTAIEFVANYGQRFLPLYSFNLRNGSWRMKKEQLQAVINQNNCNFRKTLEEANDLKPLKAGNNVGTKQVRVLRKSYLDTAKYIASLLPKFPSEAILHEDVDPDVLYFRV 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03658 669 Gene3D Aspartate Aminotransferase, domain 1 376 571 IPR015422 GO:0003824
Vian1g03658 669 PANTHER CYSTEINE DESULFURASE 51 573 - -
Vian1g03658 669 Gene3D - 120 352 IPR015421 GO:0003824
Vian1g03658 669 SUPERFAMILY PLP-dependent transferases 101 565 IPR015424 -
Vian1g03658 669 Pfam Aminotransferase class-V 102 442 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03658 Vian-Chr1 59378974 59383774 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03658 - - var:108325539 1313.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03658 1 59378974 59383774 Vian1g03658 1 59378974 59383774 ECH