Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03649 ATGGCAAGTTTAGAGGAAGACGAGTTGGTACAAATGGTGCAAGATTTTATAGAATCAGAATCAACATCCTCCACTGCTTCCACTTCCACAAATTGCCACACCTTAACCCACAGAACCCAATTTTTTATTCTGCAGGATATTCTAAGGAGTGAGGGTGATGCAGCACCTGAGACCAAGGTGTTGAAGTGTGTACTGAAACATATGAGAGGTAGAAAGGGTGCAGAGAAAACAACCAATCTCAGTAGATGGCTTGCTGTGAGGATGAAAATGGACGGTCTTAATGCTTCTATATGCCACACGTCTTGGGCCACCTCTCTGGGTTGTCCTGCAGGTGAATACGAGTATATTGAGGTGACGGTGGAGGATGAGGATTACGGTAAACCTTTGAGGGTAATAGTAGATATAGATTTCAGGTCCCAATTTGAAGTTGCGAAGCCTACGGAAGACTACAAAGAATTGACAGAGTCGGTTCCTTACATTTTTGTTGGGAGTGAGAAGAAGCTGTGCAACATAATTTCCTTGCTATGTTCTGCTGCCAAACAGTGCCTGAGAGAGAAGGGTCTTCACGTGCCTCCATGGAGAACCACATCGTACATGCAAGCCAAGTGGCTTTCGGTGAGTCGTAAAGAGGGTAACCGTGAAGGATCAAAGGGTGATGTGATTGGTGATGAAGATAGTGATATTATTGGTAACTGGGTACCTCCATTGCTGAAACCAAAGAAAAGGGATTTGGGTGGTGGATCTAGTTTGTCGAATCAATTATCTAACATGAGTAGTGTAAATTATTGTTGCTAG 795 0.4365 MASLEEDELVQMVQDFIESESTSSTASTSTNCHTLTHRTQFFILQDILRSEGDAAPETKVLKCVLKHMRGRKGAEKTTNLSRWLAVRMKMDGLNASICHTSWATSLGCPAGEYEYIEVTVEDEDYGKPLRVIVDIDFRSQFEVAKPTEDYKELTESVPYIFVGSEKKLCNIISLLCSAAKQCLREKGLHVPPWRTTSYMQAKWLSVSRKEGNREGSKGDVIGDEDSDIIGNWVPPLLKPKKRDLGGGSSLSNQLSNMSSVNYCC 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03649 264 PANTHER OS03G0796600 PROTEIN 6 214 IPR006502 -
Vian1g03649 264 NCBIfam uncharacterized plant-specific domain TIGR01615 85 207 IPR006502 -
Vian1g03649 264 Pfam PDDEXK-like family of unknown function 12 207 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03649 Vian-Chr1 59241086 59242197 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03649 - - gmx:100782815 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03649 1 59241086 59242197 Vian1g03649 1 59241086 59242197 ECH