Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03639 ATGGCTTCCTCTCATGGTAATGCACACTCTGATGCTGCAAAGATGGAACAGATAATCACTGAGTTTTTTGCCAAGAGTCTTCATATAATACTCGAATCAAGGGCACCCTATGTGTCCTCTCGCAATTTTTACGGTGATCAAGCTGCTTTGTCTCCGTGTTCATCGTCTTCATCTTCGTCCAGTGTGCGGCCGAGGGATAAGTGGTTCAATTTAGCGCTTCGGGAGTGCCCGGCGGCGTTGGAGAACATTGACATCTGGCGCCAGAACAACATTGAGTGCATAGTGATTGATGTGATTTTAGTGCAGAGACCTCTGGATTGGGACCCTGTGACTGCGAGTCTCTCTCCCAGAAGGGTTCTCCCCAGGAGTTCTTCGCTGAAGGAAAGATGCCCTTTTGGCTGGAACACTGATCAGGAAGAATTGGGGGTTGTGGGAAGGAGTGAAAAGATTGTGGAGAGGTGGGTTGTGCAGTATGAAAGTAGGAAGACAAGGGATTCTAGTTCATGCAGTAGGAGGTCAAGCAGTGTTTCTTTGCATAACTCGTATAAGAAATCAACTTTGCTTTTGAGGTCTTTGTATTCCACTCTTAGACTTTTACCTGCCTATAAAGTATTCAGAGAGCTTAATTCTTCTGGACAAATTAGGGATTTTACCCTTACTCACCGTGTGTCTTCTTTTGTTGAGCCCTTCACCCGGAAAGAAGAGGCTGAAATGATGAAATTCGGGTTCACCCCTGTGGATACTTCTTCTGGTAGGCTGTGTCTTAGTGTGATGTATTGCCCCGTGGTCTCAGGCGTGAGCTCAGAACCTTCGACTCCAATGTCCCCACAAGTTATAACAGACTATGTTGGGAGTCCATTGGCCGATCCGTGGAGAAGGTTTCCTTCTGTTCCTGTGGCAGGCTTGCCATCTCATGGCTCTCCATCATCGTTACCATCCTCAAGGCAGCGCAGTTTTAGTTTCGATCATTATAGAGCCTCACCTCCATCTTATTTACCTTCCCCTACTTATTCAGAATCACTCTCTTCAGTGTATAATGCAAGTTTGCGGCGTTTCCCCCCCGCAAGTTTGCCTCCTCATCCAACTGAGATGTCTTTGATTCAAAAGAAGAATACAAATTATGATGATTATTATCACTCTCGATCACCTTCAACCGATAATTCAGGACCATTACCATGCAAACCACTTTTACGATCTGGAAGTGCTCCTGTCAGCATACCTGCTGAAGTTGCTAATTTTCCTGGTTATTCCAATAGGCATAATGTGCCTCCGTCTCCTCCCCTAATAGGTTCAAGGGGCACTGCTAAGATTGATAGATTTACAAATGCTATGCAAACTGGTGCAACAGCTGAAAAGCTGTTTTCTCTTGGAAAAGATGAGTCTCGAAAATATTCTGGAGTCAAGATATCGTCTAACAGCTCGCCCTCCAGTAGGTCTTATCAGGATGATTTTGATGATACTGATTTTACTTGTCCATTTGATGTGGATGATGATGATATTACGGATCCAGGAAGCAGAGCTGAATCTCTAGATCATGGTCTTTTGGCTGAGACATTTGAAGGTGGAGGATTCTTTCCCATTAGAAAGTCTCATGATGCTGCTGTTGGTGCGCTTGTACAAATGCTGAAGAAAGCACCACCTCTCCGTCAAGATTTCTCCACTTCACAGCACCTGTCACAAGGAGTTACAAATCCTGAAACCTGGAACAACAACATTGGAGGGCCCAGTGAGATCCTGGAGGCATCAAAACAGGTGAGCATAATGTCTTCTGGGATCATAGCCACCAGAAAAACCACAGCTGATGCACTGGAAGAGTTCCAAGGTTACAAAGAGATGAAAAACCTGTTGCTTATGCGAGACAGTAAGCACCAGACATAG 1878 0.4515 MASSHGNAHSDAAKMEQIITEFFAKSLHIILESRAPYVSSRNFYGDQAALSPCSSSSSSSSVRPRDKWFNLALRECPAALENIDIWRQNNIECIVIDVILVQRPLDWDPVTASLSPRRVLPRSSSLKERCPFGWNTDQEELGVVGRSEKIVERWVVQYESRKTRDSSSCSRRSSSVSLHNSYKKSTLLLRSLYSTLRLLPAYKVFRELNSSGQIRDFTLTHRVSSFVEPFTRKEEAEMMKFGFTPVDTSSGRLCLSVMYCPVVSGVSSEPSTPMSPQVITDYVGSPLADPWRRFPSVPVAGLPSHGSPSSLPSSRQRSFSFDHYRASPPSYLPSPTYSESLSSVYNASLRRFPPASLPPHPTEMSLIQKKNTNYDDYYHSRSPSTDNSGPLPCKPLLRSGSAPVSIPAEVANFPGYSNRHNVPPSPPLIGSRGTAKIDRFTNAMQTGATAEKLFSLGKDESRKYSGVKISSNSSPSSRSYQDDFDDTDFTCPFDVDDDDITDPGSRAESLDHGLLAETFEGGGFFPIRKSHDAAVGALVQMLKKAPPLRQDFSTSQHLSQGVTNPETWNNNIGGPSEILEASKQVSIMSSGIIATRKTTADALEEFQGYKEMKNLLLMRDSKHQT 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03639 625 MobiDBLite consensus disorder prediction 464 485 - -
Vian1g03639 625 Pfam Autophagy-related protein 13 19 259 IPR018731 GO:0006914|GO:1990316
Vian1g03639 625 Gene3D HORMA domain 4 264 IPR036570 -
Vian1g03639 625 PANTHER UNCHARACTERIZED 3 622 IPR040182 GO:0000045
Vian1g03639 625 MobiDBLite consensus disorder prediction 466 480 - -
Vian1g03639 625 FunFam Autophagy-related protein 13b 13 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03639 Vian-Chr1 59130447 59135317 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03639 K08331 - gmx:100798585 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03639 1 59130447 59135317 Vian1g03639 1 59130447 59135317 ECH