Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03496 ATGCTTGTCTGTGCAGCGAGCTCAGGTGTGACTCACACTCCTCCACACTCTTCGCTCAGCTTCTGCTCTTCCAACGCCAAATCCCACCGAATTTTCTCCAATTCCGTCAGCCTCCCTATCACGCACAACGACAACCCTACCTCCGATTCCGATGACGCCCTCCGCCTCACCGTGCCTTCTGCCGCCGCTGTTGCCTCCGCCATTCGCAAGGCCTCCACATCCCCCGTCCAGTTCACCCAGACCCTCCAGACCGATCGCCAAACCGGACTCGTGCTTCCCAGCACTGACTTCCATCGACTCTGTCTCCACCAGCTTCACCTCTTTCGCAGGATCGTTCCCGAAGCCCTACTCTCGGTGTATGTTAGACCAGCTGGTAGTTATGTGATGGATCGGTTGGAGCTTCGACGGGTTGCACTGTACCCTGGAGATGCAGAGTCAGAGGGCATTGTCATTCTTGTGGGTCATTTTAGTATTCCTGCGGGCTTGCGTACTGCTGAGGCCACACTTTCCAATTTGCAAGTTAATGTTGTCCCTGAATGCAAGGCTGTCGTTCTTCCGATGGTGAAACACCCATTTGTTGTTGGTTTCTTGGTTGCTGAGCTTCCATTGGTGGAGGAGGAACAGTGTCAGAAAGCTCAAAGTGAGGGTCCAGATATCCACACGTCTGTTGAGGAAGCTTATTCGTTGCCTCCCTTCTTGGATTTAGACAAGAAGTCGAGGGAAATTCAGACCCTTCGGGTCAAGGACGAAAAAGTTGGTATGCGTAACTTCACTTCTGAGCAAAGATCAAATGCTGTCAACATTTCACAGTCTCTTGCTATGGCATATGTGATGGATCAGGTTTATAAGCTGCCGCCTTTGTTTTCCTTTGAACAAAAGAAGAAAATCCATTCATTAACTCATTACTCTTCAAATATGAAATGGTTGAAAGTTTTACAGTCCCCAAATTCTGTGGGATTTCCTGGAAATTTGCATTTCATAACAGTTGCTACTTGTATGTGTGCTTTGATAGTTGTTGCGTTGAAGTTCACAATTATTTTATCTATCAGTAGACTAAGTTACTGTTATGTTGTAGCGTGCAATGCATGTCTTTTAAGTTTATTTCTCTATGACATTGTTGTATGGGTTCACGACTTTTACAACAATAGCTTTAACTTTTTGTCTGGACCTAAATTTCTCATGGTTATGCTCCTTTTACAGAAAGCAATGTTACTTCAGCAATCAACATGGCAGAATAATGTCAGAATGGGTAATCTGGTTGAGCAAATCCGTGGTCCACTTTCCAGTATTCAAACCTTAAGTAAAATCCTGTCTGCACAGACAAAGAGAACTCAGATTTCATATGACATTGTTGAAGACCTCTTGGTGCAAGGTAATCGGTTGAGGGACGTTCTCCAACAACTACAGGATGCTGTTTATTTGACGAAGAATAATATAGTGCGCTACAATGAAGAAGCAATCAAGAAAATGAATGGTTCTACCCACATACTTGCTGAATCAGCTAGATCTCAATTGCTAGATAACTCCCCAGGGGATGACGTCTCTTCAAATAAAATGAAAAACTCTAGAAGATCATGCAATGTTTCTGAAGTATTGACAGAATTAGTTGATTCAGTTAGACCACTTGCCCAGGGTCAAAAACGTTTGGTGGAACTAAGTGAACTCTCATCACCTTTGCTAGCTGCTGTAGAAGAACCTGCACTGCGCCAGGCTTTCAGCAATCTTATTGAAGGTGCTTTACTACGGACGCATGTTGGAGGAAAGGTTGAAATTGTATCTACTGCAGCACCAGCTGGTGGCACCCTTGTACTTATTGATGATGATGGTCCTGATATGCACTACATGACTCAGATGCACTCACTCACACCTTATGGACAAGAACTGTTGTCTGATGGTATGATTGAGGACAATATGACTTGGAACTTTGTTGCTGGGATGACTGTTGCTCGTGAGATACTAGAAAGCTATGGCTGTGTCGTCCGTATCGTTTCACCTCGGATTAAAGATGCTCCTCTTGGAGCTGGGGGAACACGTCTAGAACTCTGGCTTCCTTCAACTGCAAAATCTGATTTGAGCAGCCACACCCAAGAGGGTATAGCATGA 2103 0.4494 MLVCAASSGVTHTPPHSSLSFCSSNAKSHRIFSNSVSLPITHNDNPTSDSDDALRLTVPSAAAVASAIRKASTSPVQFTQTLQTDRQTGLVLPSTDFHRLCLHQLHLFRRIVPEALLSVYVRPAGSYVMDRLELRRVALYPGDAESEGIVILVGHFSIPAGLRTAEATLSNLQVNVVPECKAVVLPMVKHPFVVGFLVAELPLVEEEQCQKAQSEGPDIHTSVEEAYSLPPFLDLDKKSREIQTLRVKDEKVGMRNFTSEQRSNAVNISQSLAMAYVMDQVYKLPPLFSFEQKKKIHSLTHYSSNMKWLKVLQSPNSVGFPGNLHFITVATCMCALIVVALKFTIILSISRLSYCYVVACNACLLSLFLYDIVVWVHDFYNNSFNFLSGPKFLMVMLLLQKAMLLQQSTWQNNVRMGNLVEQIRGPLSSIQTLSKILSAQTKRTQISYDIVEDLLVQGNRLRDVLQQLQDAVYLTKNNIVRYNEEAIKKMNGSTHILAESARSQLLDNSPGDDVSSNKMKNSRRSCNVSEVLTELVDSVRPLAQGQKRLVELSELSSPLLAAVEEPALRQAFSNLIEGALLRTHVGGKVEIVSTAAPAGGTLVLIDDDGPDMHYMTQMHSLTPYGQELLSDGMIEDNMTWNFVAGMTVAREILESYGCVVRIVSPRIKDAPLGAGGTRLELWLPSTAKSDLSSHTQEGIA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03496 700 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 518 665 IPR036890 -
Vian1g03496 700 Coils Coil 451 485 - -
Vian1g03496 700 Gene3D - 511 685 IPR036890 -
Vian1g03496 700 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 394 696 - -
Vian1g03496 700 ProSiteProfiles Histidine kinase domain profile. 418 687 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03496 Vian-Chr1 57509608 57514811 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03496 - - pcin:129308660 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03496 1 57509608 57514811 Vian1g03496 1 57509608 57514811 ECH